Hippoglossus stenolepis (Pacific halibut): 118114672
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Entry
118114672 CDS
T08308
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118114672
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118114672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
HIRA_B
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
118114672
NCBI-ProteinID:
XP_035021121
LinkDB
All DBs
Position
9:28044518..28055588
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AA seq
1022 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNESIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWRRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQMEANITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLSEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQNSAQATAGPG
SAGPESSAPKLNSVMNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPAL
FNSVPILPSGSSMSNHLTPQLSSDSSPGQASSLGLRPGIDPMLTSPAAGGLKGLDDIKDG
VKSTLLLTSATKIEPMKALDSRFTERSKATPGITAVITSISGLVPLDRSQFKPKDGISVL
KDVKAKEDSSSDSEDKMATINKNLSFSKRKPELLMDGAEVVEKRKKGRPRKDKIAAPSAQ
PFAQVTPPAEREPSRVTAAPAPVAVLRLPTPKTQKSFSLQVSMEPSVFLEVENEVSVVAG
SKLSQLRCSRDGRDWNTLLPSSVVTAAGSSDVLAVACEDRMLSVFSSCGRRLLPAIQLGT
PVSALHCAAHFVMALTAGAALSVWDVQKQKALVKNESLRNILSGVDISVSQSLLTQQGVP
VIGLSNGKSYCFSSSLETWTLIADKGDSLVQCADFRSCLPSHDAPVTSGPLAVMQGRNLN
AGRLASRLSSTPHHLQQSMTLAFLENQLAAALTLQSAQEYRYWLLIYARFLVNEGSEFRL
RELCKELLGPVHKSAATSWEPTTLGLRKRELLREVLPVIGENLRFQRLFTEYQDQLELLR
NK
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgagctgggtgagccacaacggcaaacccatattttcagtggac
attcatcctgatggcacaaagtttgccactggtggacaaggggaagattctggaaaggtg
atgatctggaacatggcgccggtcctcagggaggaggacgagaagaacgaaagtattccc
aaaatgctttgccagatggacaatcacctagcgtgtgtgaactgtgtgcgctggtccaac
aatggactgtacctggcatcaggaggagacgacaagctggtcatggtgtggaggagagct
gcattcatcggtccgagcacagtgttcgggtcgagcagtaaactggccaacgtggagcag
tggaggtgtgtcaccatcctgaggaatcacaccggagatgtgatggacgtggcctggtct
cctcatgacgtgtggctggcctcctgcagcgtcgacaacaccatcgtcatctggaacgct
cgtaaattcccagagatggtcacatgtctgcggggacacactgggctggtgaaaggcctg
acctgggacccggtggggaagtacatcgcctcccaggccgacgaccacagcctcaaagta
tggaggacgatggactggcagatggaggccaacatcaccaaacccttcaacgagtgcggc
gggacgacccacgtcctgcgtctgtcctggtccccggacggtcagtatctggtgtcggct
cacgccatgaacaactccggccccacggcccagatcgtggaaagggacggctggaagacc
aacatggacttcgtgggtcaccgcaaagctgtcaccgtggtgaaattcaacccaaagatc
tttaagaagaaacagaagaacggcagctccccgaaacccagctgtccgtactgctgctgc
gccgtcggcagcaaggaccggtcgctctcagtctggctgacctccctgaagcgccccctg
gtggtcattcacgatctcttcgataaatcgattatggacatctcctggactctgacgggt
ctggggatgttggtgtgttccatggacggcactgtggcctacctggacttctcactggat
gaactgggagacccgctgagcgaggaggagaagaacagcattcaccagaacatctacggg
aagagtctggctataaccagcaccgaggctcagctctccaccaccatcatcgagaaccct
gagatgctcaagtaccagcaggagcgacagaactcggcccaggccaccgcggggccgggc
agcgccgggcccgagtcctccgcccccaagctcaacagcgtgatgaacggagagtctctg
gaggacatcaggaagaaccttctgaagaaacaagtggagacgagaaccgcagacggcaga
agacggatcacgccgctgtgcatcgctcagctggacacgggggacttctcaccggctctg
ttcaacagcgtccccatcctgccctcgggctcctccatgtccaatcatctcacccctcag
ctcagctctgactccagcccaggacaggcctcctctctggggctgaggcccggcattgac
cccatgctcacctcgcctgcagccggcggcctcaagggcctggacgacatcaaagacggt
gtgaaatccactctgctgctcacctccgccaccaagattgagccgatgaaagctttggac
tccaggttcaccgagaggtcaaaggccacgccggggatcacggccgtcatcacctccatc
tctggcctcgtgcctctagacaggtctcagttcaagcccaaagacggtatctctgtcctg
aaagacgtaaaagccaaagaagattccagcagcgacagcgaggacaagatggccaccatc
aacaaaaacctgtcgttcagcaagaggaagccggagctgctgatggacggagcagaggtg
gtggagaagaggaagaagggacggcccaggaaagacaaaatagctgctcccagtgcccaa
cccttcgctcaggtgactcctccagcggagcgggagccgagcagagtgacggctgctcca
gctcctgtcgctgttctcaggctcccgacgccaaaaacacagaaatccttcagtctgcag
gtgagcatggagccgtcggtgttcctggaggtggagaacgaggtgtcggtggtggccggt
tcaaagctcagtcagctgcgatgctccagagacggacgagactggaacacgctgctgccc
agctcagtggtcactgctgcaggaagcagtgacgtccttgccgtcgcctgcgaggacagg
atgttgtctgtgttctcgtcctgcggtcgtcggctgcttcctgccatccagctgggaaca
cctgtgtccgctctgcactgcgcggcccacttcgtcatggctctgacggccggagcggcg
ctctccgtctgggacgttcagaaacagaaggcgctggtgaagaacgagtctctgaggaac
attttatctggtgttgacatctcggtgtctcagtctctgctgactcagcagggggtcccc
gtcatcggactctccaacgggaagtcgtactgcttcagctcctcgctggagacttggact
ctgatagcagataaaggagactcgctggttcagtgtgcagacttcaggagctgcctacct
tcccatgatgcacctgtgacctcggggccactggctgtaatgcagggacgcaacctcaat
gctggtcgtctggcgtcccgtctctcctccacgcctcaccacctgcagcagagcatgacg
ctggccttcctagagaaccagctggcggcggctctgaccctgcagtcggcgcaggagtat
cgttactggctgctcatctacgcccgattcctcgtcaacgaaggctccgagtttcgtcta
agagaactctgcaaggagctgctgggtcccgtccacaaatctgctgccacatcctgggag
cccacgactctgggtcttcgtaagcgggagctgctccgggaggttttacccgtcatcgga
gaaaacctgcgcttccagaggctgttcacggagtaccaggaccagctggagctgctgcgc
aacaaataa
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