Hippoglossus stenolepis (Pacific halibut): 118114767
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Entry
118114767 CDS
T08308
Name
(RefSeq) synphilin-1
KO
K04558
synphilin-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
23S_rRNA_IVP
Motif
Other DBs
NCBI-GeneID:
118114767
NCBI-ProteinID:
XP_047197064
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Position
9:complement(28305774..28317033)
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AA seq
946 aa
AA seq
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MEAPEYLDLDEIDFSEDSVFSVTSLKSIPELSRRSDGQADERPAPAINWSRGVSSHSGGG
IKPTGLAEVHSKFRPVKRVSPLKHQPETTDSDSDGKAPGQGLGLGEPGEASKDDPSSDKP
THASTSSDGPGGKGKGLASVGVGVVGGNNPQALFGELEHYDLDMDEILDVPYIKSSQQMS
TLPRVPHDKRSVTGSNLGGGTLERTRGGGLKSSTLSHNEPLSLGSSSSQTQYCVLSPVKW
SDLRKSKSMDPDLHHLHRSQTGGGYQPELLSSGLLSCSSSLSSFSDADKLLSARVYPDSQ
TQRPGVEPPGGPALMFPLPGCSVGRQDGSKPRAPGAGGGAGGAGGLRGFGGGGTELDEET
KKNQNIMNIVRDGQISLLPHLAADNLELIRDDDGNNLLHISASQGHADCLQHLTSLMGED
GLNERNSQQLTPAGLGVKNGHLECVRWMVSETEAIAELSCTREHPSLIHYAGRYGQEKVL
LWLLQFMQEQAISLDEVDQNGNTAVHVAAQYGHLTCIQTLVEYGSNVTVQNQQGERPSQS
AERQGHTTCARYLVVVETCMSLASQVVKLTKQLNEQATERMTLQKQLQRVMDPNKAEGTP
SRSPSSHQPSVEAWPEMMLTAEGTDGHWSVRQGGVSQDAVVRQLLGKEAPDTLCPRDKLP
PARGLSREGPAGPAGPAGPGGPAGPGAPGAPGPRASRTGLVERRELKLARLKQIMQRSLS
ESDSDGYPPEEGKSQGAPPSNTVRPDRPSHLPITEEEPVSNHLNLTMNKHLPSSSSSTTE
RKQAFSLSGSKSVDSIGYNPSPTSSDPEAADAKTTDASADLQDAANGQKVATSPKSALKS
PSSRRKTSQNLKLRVTFDEQVHKSSSQEAEPTKVHHGKERTSTGGSESKRPFGAFRSIME
TLSGNTNHNNNSGGQSGAASQNSPGRKSEGKSGAGGARVKSRTSNV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcctgaatacctggacctggacgagatcgacttctctgaagactctgtgttt
tctgtgacgtctctgaagagcatcccagagctgtccaggaggagcgatggtcaggccgac
gagagaccagctccagccatcaactggagtcgtggggtttcctcccacagtggcggggga
atcaaacccacggggcttgccgaggtccatagtaagttccggccggtgaagagagtctct
cccctcaaacaccaacctgagacgacagactcagactctgatgggaaagccccgggtcag
gggctgggtctgggggagccaggggaggccagtaaagatgaccctagctccgacaagcca
actcatgcctccacctcctccgacgggccgggggggaaggggaagggcctggccagcgtc
ggcgtcggtgtcgttggagggaacaaccctcaggctctgttcggggagctggagcactac
gatctggacatggacgagatcctggacgtgccttacatcaaatccagtcagcagatgtcc
acgctgcctcgcgtcccccacgacaagcgctcagtgacggggagcaacctgggggggggc
acgctggagaggacccggggaggaggactgaagagctccactttatcccacaacgagcct
ctgagcctgggaagcagcagctcgcagactcagtactgtgttctgtctccggtgaagtgg
tcggacctgaggaagtccaagtccatggatccagatctccaccacctgcaccgctcccag
actggaggaggttaccagccggagctgctctcctccggactcctcagctgctcctcctcc
ctctcctctttttctgatgcagacaagctgctgtcagcgcgggtctacccagactcccag
acccagaggccgggcgtggagcctccagggggcccggctcttatgttccccctgccaggg
tgcagcgtgggcaggcaggacggctccaagcccagggcccctggagcaggaggaggtgca
ggaggggctggtgggctgagggggttcggaggaggaggaacggagctggacgaggagacg
aagaagaaccagaacatcatgaacatcgtcagagatggacagatctcactgctgcctcac
ctggcagcagataacctggagctgatcagagacgatgatggaaacaacctgctgcacatc
tcggcgtctcagggtcacgccgactgtcttcagcatctcacctctctgatgggggaggac
ggacttaacgagcgcaacagccagcagctcacccctgcaggcctgggggtcaagaacggt
cacctggagtgtgtgaggtggatggtgagtgaaactgaggccatcgctgagctgagctgc
accagagaacatcccagtctgatccactatgctggtcgctatggacaggagaaggtgttg
ctgtggttacttcagttcatgcaggaacaggcgatctcattggacgaagtcgaccagaac
ggaaacacggccgtgcacgtggccgctcagtacggacacctcacctgtatacagactctg
gtggagtacggctccaacgtgacggtccagaaccagcagggggagcggccttcccagagt
gccgagcggcagggacacaccacctgcgctcggtacctggtcgtcgtggaaacgtgcatg
tcgctggcctcgcaggtcgttaaactcaccaagcagctcaatgaacaagcaacagagagg
atgactctacagaaacaactgcagagagtgatggaccccaacaaggcagaaggaacgccc
tcccgatcccccagctcccatcagccctcagtggaggcgtggccagagatgatgttgaca
gcagaggggactgacggtcattggtcggttcgtcagggaggagtcagtcaagacgctgtg
gtccgccagctgctggggaaggaggcgccggacacgctgtgtcccagggacaagctgcct
cctgcaaggggcctgagcagagagggccccgctggccccgctggccccgctggccccggt
ggccccgctggtccaggggcccctggggcccccgggccccgggccagcaggacagggctg
gtggagaggagagagctcaaactagcgagactcaaacagatcatgcagcgctctctcagt
gagtctgattcggatggttatcccccagaggaaggtaaaagtcaaggggccccgccctca
aacactgtgcgccctgataggccgtcgcacctgccaatcacagaggaggagcccgtgtca
aatcaccttaatttgacgatgaataagcacctcccctcctcttcctcctccacaactgag
aggaagcaggctttttcactcagcgggtcaaagtcagtggacagcattggttacaatccc
tcccccacctccagcgaccccgaggccgcagacgccaaaacaacagacgcctctgccgac
ctgcaggacgccgccaacggccagaaagtcgccaccagccccaagagtgcactgaagtcc
ccctcgtcccgcaggaagacgtcccagaacctcaaactgagggtgaccttcgacgagcag
gtccacaagagctccagtcaggaggcggagcccaccaaagtgcatcatgggaaggagagg
acttcaacaggaggctctgagagcaagcggccgtttggggcgttccgctccatcatggag
acgctgagtggaaacacaaatcacaacaacaacagtggtggtcagtcgggcgctgcctct
cagaactcacccggcaggaagtcagagggtaagagcggcgcaggaggagccagagtgaag
agcaggaccagcaacgtttaa
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