Hippoglossus stenolepis (Pacific halibut): 118114777
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Entry
118114777 CDS
T08308
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118114777 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118114777 (rab11fip1a)
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118114777 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF7783
Motif
Other DBs
NCBI-GeneID:
118114777
NCBI-ProteinID:
XP_035021309
LinkDB
All DBs
Position
9:11198604..11212069
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AA seq
1252 aa
AA seq
DB search
MSLVDQSQKWFPTSVQVTVHQARSLRVKGKNGTNDSYAIMQVAKDKFSTSVAEKSVAPVW
KEEASFDLPLFHPGNAERCTLHVIVMHRAQVGLDKFLGQAVINLLDLHDDRSRTKTDWFK
LVDKSGKADKVRGEVLLDIQFMRNNMSASMFDLSMQDKPRSRISKLKDKVRGKKKDSFSD
SASAIVPSVSQVLTDSDGEADAQSLNQSVKKKSKLKSLFAPKSNLQRNISQSMSTLGTLP
EKNSSLSGSRSSGLNVDSPEVKKKFKFLGHKRSGSSDSKVSQGPFSLLGRSKQSNSDQNN
FCINGSHVYTEETEPKSGSTLSLNSSGQGSVEDVHKHTSDASASSSRSVADPTPTSRHES
TDRAILEQQRHQQEEERRQAEERHIAEVKRVEDEEKYRADARRLQEEEERRYQEEQERNR
KFLEDEARRKKQREEEEEEKRKQEEEHRMRHAAENQNLEEERRKSEEQKRQEEASMSDRL
STLFGMIRKKEEKKEEVQQQTKEELPETAPRSDSSSLDQPISHHSTNPFEDIPLSSNESP
ADPQKSSRNPQTPSAMVFLNRTAKVSAVKPRLVQILESEPPDCQTPSQLCPSPAASESTL
SSVPSEPPDSFSKFHSSLPPPNVSKSLSGSPRGSTEDLSSVESEGSSPTMADKKKNAPLP
PTYHLHGNQTGGNPIPVREMKSPFVEADGSQQGKKMSIPLPDYESLFPKKRHGVQGHTLW
DHITAEVNQRQRDTAPELLGPEMSVDGPVGHDPSPRSFTSQESPAMRHYQTIPEETKPMS
LKKAAAPAPPKPVLSPHPQSIGQNQYTAQQSGMRPNPSAVQGPRNTDLASREGLSGMSRD
GARKALQPSPAATLAPRPSIQMDTSPPEDQRKEAPTAKPRQRSNGNEPIQKEVSAADKKQ
NSNAQTLFSQSVKSMDKKSRQARENLVEFDPFPSTELLSKDPWAQQKQKQEVDNLLTGNI
QKEQKPEIQGMTADDLDNIFSQDKPTDPFASFSRSNSNNQSPKRKDSEQAGFHAFQRKTS
QRRSLTSKTPLEDKGLQSQQEPASKEGTTKMAANQDLVTNDVRKEPVALQPQADVKTQSG
FYKVEDQFGAEPFAVPSALTSSEPLQAITEEPGALSGGKTLLQAWVSPSEVQPVSAQNSN
GGGQALTARRPHPVKPLTSVESQHATSTQTGKEIKVRDSTPGKIKVADPLGSGPYTQLTQ
GELITMVVKQQTDLSKKDAKIVELEEYIDNLVVRVIEEKPSILQALNATKQV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtggaccagagccagaagtggttccccaccagcgtccaggtaacggtgcac
caggctcgaagcctgcgcgtcaaggggaagaatggcaccaacgactcctacgccatcatg
caggtggccaaagacaagttctccacctcggtggccgagaaaagcgtcgctccggtgtgg
aaggaggaggcttcgttcgacctgccgctcttccacccgggaaacgccgagcgatgcacc
ctgcacgtcatcgtgatgcaccgggcacaggtgggactcgacaagttcctgggtcaagct
gtgatcaacctcctggatctacacgacgacaggtcccgcacaaagaccgattggttcaag
ttggtggacaagtctggaaaagcagataaggtgcgaggggaagtgctgctagatatacag
ttcatgagaaacaacatgtcggccagcatgtttgacctgtctatgcaagacaaaccacgc
tcacgcatctccaagctgaaggacaaagtccgtggaaagaagaaggacagcttctctgac
tctgcctcagccatcgttccctctgtcagccaggtcctcactgacagtgacggagaggct
gatgctcagtcactcaatcagtctgtgaaaaagaaatccaagctcaaatccctctttgca
cctaaatccaacttgcagcgtaacatttcacagtccatgtctacactggggactcttcct
gagaagaactcatctcttagtggcagccgctcatctggcctcaatgtagactcacctgaa
gtgaagaagaaattcaaattcctgggacacaagcgatcaggcagctctgacagcaaggtg
tctcagggtcctttctccctactgggtcgctccaagcagagcaacagtgaccagaacaac
ttttgcatcaacggcagtcatgtgtacacagaggagacggagccaaagagtggatctact
ctcagtctgaacagctcaggccaaggctctgtggaagatgtccacaaacacacctcagat
gcctctgcaagttcctccagaagtgtagctgaccccacccccacctccaggcatgaatca
acagacagagctatactggagcaacaacgccatcaacaggaggaagagagacggcaggca
gaagagaggcacatagccgaagtaaagagggtggaggatgaggagaaatacagggcagat
gccaggagactgcaggaggaagaggagcgcagatatcaagaggaacaggagaggaaccga
aaattcctcgaggatgaagcaaggaggaagaaacagagggaggaggaggaggaagaaaaa
agaaagcaagaggaagagcataggatgcgacatgcagcggagaatcagaatcttgaggag
gagcgtcgcaaatcagaggagcagaaacgacaggaggaggcctccatgagtgacaggctg
tcaactctgttcggaatgatcagaaagaaggaggagaaaaaagaggaggtgcagcagcaa
actaaagaggagttgcctgaaacagcccctcgcagtgactcaagcagtcttgatcaaccg
atctcccaccactccactaacccatttgaagacattcctctcagcagtaatgaaagtcca
gctgatcctcagaaatccagccgtaatcctcaaaccccatcagccatggtcttcctcaac
cgcactgccaaagtgtctgcagtcaaacccagattggttcaaattctggagtctgaaccc
cctgactgccaaacccccagtcagctgtgtccttccccagccgcctctgagtccaccctc
tctagtgtcccgtctgagccccctgatagtttctccaaattccactcatcgttgcctcca
ccaaacgtaagcaaaagcctgtctggttcccctcgtgggagcacagaggatttgtcatct
gtggaatctgagggatcttcacccaccatggcggacaagaagaaaaacgcccccctgcca
cctacgtatcatctacatgggaaccaaacaggaggaaatcccattcctgtcagagagatg
aaaagtcctttcgtagaggcagacggatcgcaacaaggcaaaaaaatgtctataccactt
cctgattatgaatccctcttcccaaagaagaggcacggagtacaagggcacactctgtgg
gatcatattaccgctgaggtcaatcagagacaaagggacactgcacctgaacttctgggt
ccagagatgagtgtggatggcccagtggggcatgatccgagtcctaggtcgttcacatcg
caagagagtcctgccatgaggcattatcaaacaatacctgaggagaccaaacctatgtcg
ttaaaaaaggcagcggccccagctccccctaaaccagtcttatccccacatcctcaatca
atcggtcaaaaccagtacactgcccagcagtctggcatgagacctaatccgtctgcagtg
cagggaccgagaaacactgacttagcaagcagagaaggtctctctgggatgtccagggat
ggagcgaggaaggcgttgcagccatcacccgcagctacacttgcacccagaccaagtatc
caaatggacacaagtccaccagaagatcagcggaaagaagcacccactgccaaacccaga
cagaggtctaacggcaatgagccaatacagaaagaagtttctgctgctgacaaaaaacag
aacagtaatgcccaaacattatttagtcagagtgtgaaaagcatggacaaaaagagtagg
caggcaagggaaaacttggtagagtttgacccgttccccagcactgagcttctatccaaa
gacccgtgggcacagcagaagcagaagcaagaagtcgacaaccttttgactggcaacatc
cagaaagaacagaaacctgaaattcagggaatgacagccgatgatcttgataacattttt
agtcaagataagccaacagatccctttgctagttttagtcgcagcaattcaaacaaccag
agtccaaaaaggaaagactcagagcaagcgggctttcatgcttttcaaagaaagacttca
cagagacggagtcttacatcaaaaactcccctggaagataaaggtctccagtctcaacaa
gagccagcatctaaagaaggaacaaccaaaatggcagctaaccaagacctcgtcacaaac
gatgtcaggaaggagccggtcgcacttcagcctcaagctgacgtgaagacacagagcggt
ttttacaaagtagaggatcagtttggagctgaaccttttgctgttccctctgcgttgact
tcctctgagcccctccaggctattacggaggaaccaggggctctgtctgggggaaagaca
cttttgcaagcgtgggtctcaccgtctgaggttcagcctgtcagtgctcagaatagcaat
ggaggtgggcaagccttaacggcacgcaggcctcatcccgtgaagcccctgacctcagtt
gagagccaacatgccaccagcacccaaactgggaaggagataaaggtccgggacagtaca
ccggggaagattaaggtggcagacccgttaggaagcggaccttacactcagctcacccag
ggggagttgatcacaatggtggtgaagcagcaaacagacctgtccaagaaggacgccaaa
atcgtggagctggaagagtacatcgacaacctggtggtgcgagtcatcgaggagaaaccc
agtatcctgcaagccttaaacgccaccaagcaagtgtaa
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