Hippoglossus stenolepis (Pacific halibut): 118114802
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Entry
118114802 CDS
T08308
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118114802
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
118114802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_17
TPR_11
RPN7
TPR_14
TPR_9
TPR_6
TPR_19
TPR_NPHP3
PUB
ARM_TT21_5th
HlyE
BTAD
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
118114802
NCBI-ProteinID:
XP_035021377
LinkDB
All DBs
Position
9:10415080..10598171
Genome browser
AA seq
2479 aa
AA seq
DB search
MEKPATLKGKFSIFSSRAAGRPIRCLGGDDVVGYGLSKAEFMEKVQQSNEACQRGDFEAA
VHLYSEALRADPQNCILYSNRSAALLKMGQHQVALEDAEKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMIEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIVQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPAVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGHLQQSLVCFEKRLVVAHELRECGGKAHAYGELGALHSQLGNYEQAI
SCLERQLAIARDTQDRLLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGSPARQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQETDPY
TPVTVEHILDNVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGLSEGGSDFQ
EGGGSGVVSGSSLEQQIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLTRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGSNLKAHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMVAELLG
CQPLAGSFATKERVMSALTQAECAHFATHISWKLAALVLTPNPESVHGGASASVGVGTVG
RGAGGSRGSSGRGRKGSIGTSYTIPESLHMQDDSSDVESICDSPPLQEFLLTAADILDLR
LPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYTA
LLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQFP
DRVRDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGIPGWQALLTAVGFRLDSA
GPGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKN
MVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVV
LKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPMGYSSL
PFSSHCLDNQASDAISVYSLSSVASTMSFASKSECDFLSHRQRSGATAHYSIHKHPHVPR
SRSSPHGAAAAVAGARGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVVGG
SGTGAGRGYTVSISSRGSVSTPTSPVKTSLVPSPNSPFQKVGKVSSSDTGESDQSSTETD
STVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGAEGGTAGGTSARSSAFRSSE
TSAFSRPNSSASGRAQTSPKPKPPSRSSSLQKISSGYNSPAVSESSQKEGSHPSPTLDSN
AMKLKYPSSPYSGHISRSPSNVSPSSGHQSPVGSAPSPALSYSSTGSACSTSADPPDLDR
LRRGVIDEKVQAIHNLKTFWANAAAQHQHHLRPVRAVHSSPGPLASASRDVLSLLNLSPR
RCSPNDTQDSLELRELGLQSLDRGSKNSSNGHHCSNSRKVAPSPTISTSSSPGARSIRLP
AGNGYKFLSPGRFFPSSKC
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccagcgactctcaaaggaaagttttcaatcttcagttctcgggcagcgggc
agaccgatccggtgtctcggtggggacgacgtggtcgggtatggtctcagcaaagcagag
ttcatggagaaagtgcaacagagcaatgaggcgtgtcagcgcggtgactttgaggcggcg
gttcatttgtacagtgaggccctgcgagccgacccacagaactgcatcctgtatagtaac
cgttcggcagctcttctcaaaatgggacaacaccaagtggctctggaggatgctgaaaag
gcttgtgagcttaatcccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgctctggccgccttcgcctccgggctggcccaagacccc
aagagcctacagctcctggtgggcatgatcgaagccgccatgaagtcgccactacgagaa
tctctcgagcccacctatcagcagctgcaaaagatgaagctggacaagagtccctttgtg
gtggtgtctgtgattggccaggagctgctgacagcaagccaccacacggcttctgttgtg
gtgctggaagcggctttgaagatcggcacgtgcagcctcaagctacgcggctccgtcttc
tctgccctcagcagcgcccactggtccctgggcaacacggagaagagcaccggctacatg
cagcaggacttagaggtggccaagaccttaggtgaccaaacaggggaatgccgcgctcat
ggaaatctgggctcggcattcttctccaagggaaactaccgtgaagcgctgaccaaccat
cgcaaccagctggttctggccatgaagttaaaggacagagaggctgcttcgatggcactg
agcagcttgggccatgtatatacagccataggagactatccaaacgccctggccagccac
aagcagtgcgtcctgctggccaagcagtccaaggatcagctgtctgaggcgcgcgagctg
ggaaacatgggggccgtctacatcgccatgggagactttgaaaacgctgtccagtgtcat
gaacagcacctgggcatcgccaaggccctggaaaataaacgcgaggaagctcgggcctac
agtaacctaggcagtgcctaccactaccaccggaactttgacaaggccatgtcctaccac
acgcatgtgctggagctcgcccaggagctggaggaaaagtccattgagatgagagcctac
gcgggactgggccacgcagcccgctgtatgcaggacttggagagagccaagcagtaccat
gaacagcagctgtctatagctgagggtttgaaggacagggccgcagagggaagggcctcc
tccaatctaggcattatccaccagatgaagggagactatgagaccgcactgaaactccac
aaaacacacctggccattgttcaggagctgaacgactacgccgctcagggccgggcatat
ggtaacatgggtaacgcctacaacgccctgggagccttcgaccaggctgtgcgctaccac
cgccaggagctgcagatctccatggaggtcaatgaccgggcctcgcaggcatccacccat
ggcaacctggctgtggcataccaagccctgggagcccacgaccgtgctctgcagcattac
cagaaccacctcaacatagctcgtgagctcagagacgtgcagagcgaggcacgggctttg
ggcaacctcggcaacttccactgctcgcgaggagagttcccccaggccgtgccctactat
gagcagtacctccggctgtcccctgacctccaggacatggagagtgaagggaaagtttgt
cacaatctgggttatgcccactactgcctgggcaactatcaggatgctgtcaaatactat
gagcaggacctagctcttgccaaggaccttcatgacaaactgagtcaggcgaaggcttac
tgtaaccttggtttggcattcaaggccctcggagactttactaaggcagaggagtgtcag
aaatacctcctgtcactggcccagtctctgaacaacgcacaggcccgcttcagagctctg
ggaaacctgggagacatatttgtctgtaagaaggatgtggccggagccattcagttttat
gagcagcaactggccttagctcaccaggttaaggagcgtaggatggaggcctgtgcctat
gccgccctgggggccacctacagacttgtgcagaaatatgacaaagctctgggctaccac
acccaggagctggaggtgtaccaagagctgggcgatgttcctggagagtgcaaagcccac
ggtcacctggcagctgtctacatggccctggggaaatacgccatggccttcaagagctac
gaggagcaattggagctcgggcggaggctgaaagatcctgcagtggaggctcaggtgtac
gggaacatgggcatcactaaaatgaatgtaggggtgatggaggaggctattggctacctg
gagcagcagctggccactttacagcagctgagtggcaacgaggcggtcatggacaggggc
agggcctatgggaacctgggagactgttatgaggctctgggagactttgaggaagccatc
aagtattatgaccaatatctgtcagtggcccagagcctcaaccgcatgcaggaccaggag
aaggcctacagaggcttaggcaatggacacagggccatgggacacctacagcagtcgctg
gtgtgttttgagaagcgactagtggtggctcacgagctcagggagtgcggaggcaaggcc
cacgcctacggtgaactaggtgctctccacagccaactgggcaattacgagcaggccatc
tcctgtctggagcgtcagctggccattgcccgtgacacccaggaccgactactggagggg
gacgcaagctgcggtttgggtgttgtatatcaatctatgggagagtatgagacagccctg
cgatgccaccaaagtgacctggagattgcagaggagacgggcagccccgcacgccaggca
cgcgcctacggcaacttgggccttacctatgagtcgctaggaaactacgagcgggcagtc
gtgttccaagaacagcacctaagtgtggcagcacagactaatgacttggctgccaagact
ctggcctatggcagcctggggagaacacaccatgcactgcaaaactactcacaggctgtc
atgtacctgcaggaaggcctgcggctcgcggagcagctggctcggcgtgaggacgaggcg
aagatccgccaccgtctcgggctctctctgtgggccagtgggaatctggaggaagcccaa
catcagctctaccgggcatctgcactgtttgaaacaatccgccatgaagcccagcacagc
acagactataaactctccctgtttgacctgcaaacttcctgctaccaggcactccaaagg
gtcctcgtcagcctaggtcaccacgatgaggccctggcggtggcggagaggggtcgtaca
cgagccttcgccgacctcttggtggagaggcagaccggccagcaggaaacagacccctac
accccagtaacagttgagcacatcctggacaacgtcaacagccagagggccttggtgcta
tatttctccatggctgctggttacttgtacagctggctgctggctccaggagcaggtatc
ctgaagtttcatgaggtgtacttgggcgagggtttgtcagaaggagggtcagacttccag
gagggcggcggcagtggagtggtcagcggctcatcgttggagcagcaaattgccagtgcc
cgggaggccctcggagtggagtcttattacagccgagggtgttcgagcagcgagacagag
agcgaggctggagatttgttggaccaacaattcgaggagctcaacaacaagcttaactcg
gtcaccgatccaacaggcttcctgcgcatggtgtccagaaacaacctgttcaacaggagt
tgccagagtatgaccagcctgttcagtaacaccatgtctcctgccaaagatggtaactct
tccctaactcgccgctccagcaacctcggcaaacctccactccgggcactttatgatttg
ctgattgcacctatggaggggggcttgatgcactccagtgggcctgttggcagacacaga
caactggtgatggtgctggagggagaactgtacctcatcccctttgctctgctaaaagga
agctcctctaatgaatatctgtatgaacgcttcagcctcatcgctgttccctccatccat
ggccttggatccaatctaaaggctcattctcggcgcccaggaccagctccgtgtggcggt
gtctcgatggcagcagtggtggggaaccctcgcctgccctcgcctgtgatggaccgctgg
ctatggggacccatgccctctgcggaggaggaggctctgatggtggctgaactgcttgga
tgccaacccttggctggctctttcgcaaccaaggagagggtgatgagtgccctcacacaa
gcagagtgcgcccactttgccacccacatttcttggaaattggcagctctggtgctcacc
ccaaaccctgagagcgtgcatggtggggcaagtgctagtgtgggagtgggaactgtgggc
agaggggcaggtgggagtagaggcagcagtggcagaggcaggaagggctcgattggaacc
agctacaccatcccagagtctctccacatgcaggatgacagcagtgatgtggagagtatc
tgtgacagtccaccgctgcaggagttcctccttacagctgcagatatattggacctgagg
ttgcctgtcaagctggtggtgctgggttcataccaggagtccagcagcaaggtcacagca
gacggtgtcgtgggattgaccagggccttccttgccgctggggctcagtgtgttctcgtg
tccttgtggcccgtccccgtcgcggcctccaaggttttcgtacatgccttctacactgcc
ctgctcaatgggaccaaggctagtgcagcactggcagatgccatgaagactgttcagagc
agcaagcagtattcacacccctccaactgggcaggatatatgctgattggcaatgatgtg
aagctcaacagcccatcttccctcatcggccaagctttggcagagattctgcagtttcca
gaccgagtgcgtgatgctctgagagtgttactccatctggtcgagaagtctctgcagagg
atacagaacggccagcgtaactccatgtacacatcccagcagagtgtggagaacaaggtt
ggggggatccctggctggcaggccctgctgacagcggtgggcttccgtcttgactctgca
ggccctggtatccctgctgctgtcttctttcccactgcagacccaggagacaggcttcag
cagtgcagcactactttacaatcactactgggtctaccgccaccagctctccaggccttg
tgcaaactcatcacagcatcagaggcaggagagcagctcatcaaccgggctgttaaaaat
atggtggcaatgctccaccaggtgctcgtccaactccagacaggagagaaggagcaggat
ttctccctcctgcccattcaggtgtccattagtgtgcagctatggagactgccaggatgc
catgagtttctggctgctcttggatttgacttatgtgaggtcggccaagaagaagtggtg
ctgaagacaggcaagctagccaaccgccgcaccttgcactttgccctccagtctctgctg
gcattgttcgactccacagaactgcccaagcgtctgagcctggacagctcatcttccctt
gagtctctagcctctgcccagtctgtgtccaacccgctgcccatgggatactcaagcctt
cccttctcttctcattgcctggacaatcaggcatcagatgccatctctgtctatagcctc
agctctgtagcctctaccatgagctttgcctccaagtcagagtgtgatttcctcagtcat
cggcaacgcagtggggccacagcacactactccatccacaaacaccctcacgttccccgc
agtcgctcctcccctcatggggcagctgctgcggtggcaggagcccgaggggatgaggag
gaatatgagggtttttccatcatcagcagcgagccgctgggaagtcactgtgactccttg
cctctgccgccaggccacagccagcgccaccaccgtggaggcaggggggtcgtcggtgga
tctggcacaggagcagggagaggctacactgtgtcaatatcatcaaggggcagtgtcagc
acccccacatccccagtaaaaacaagcctggtgcccagcccaaattcaccattccagaag
gtgggtaaggtgagcagttcagacacaggtgaatctgaccagtccagcactgagaccgac
agcactgtcaagtctcaggaagaaaaaactgtccctctggatcctcaggagctggcccag
aagattctggaggaaactcagagccatctacgggctgtgggtagccttcagcgagctggg
gcagagggtggcacagctggaggaacctcagcacgtagcagcgccttccgatcttctgaa
actagtgcttttagccgtcctaacagcagtgctagtggccgagctcagacttccccaaaa
cccaaacctccctcacgttcctcttcactgcagaagataagttcaggctacaatagtcct
gcggtttccgagtcttcccaaaaggagggcagccatccttcgcccactctggacagcaat
gcaatgaaactcaagtacccaagctccccatacagtggccacatttcacgttcaccgagt
aatgtgtctcccagttcgggtcaccagtccccagttggtagtgctccatcccctgccctg
tcctactcctctacaggctctgcctgctctacatcagctgatcctccagacttggaccgg
ctaagaagaggggtgattgatgaaaaagtccaagctatccataatctgaagaccttttgg
gctaacgctgcagcccagcatcagcatcatctacgtcctgtcagagccgtccacagttct
cctggaccccttgcctctgccagtcgggatgtactgagccttctgaacctctcgccacgc
cgttgctcccctaatgatacccaagacagcctggagctgcgggagctggggctgcagtca
ctggacaggggcagcaagaactcttccaatggacaccactgctccaacagtagaaaagtg
gctccatcacccactatttccacaagcagtagccctggtgctcgttctatccgactacct
gctggcaatggatacaagtttctgtcacctgggagatttttcccatcctcaaaatgctga
DBGET
integrated database retrieval system
