Hippoglossus stenolepis (Pacific halibut): 118114812
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Entry
118114812 CDS
T08308
Symbol
samd1b
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118114812 (samd1b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
118114812 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
DUF4777
Motif
Other DBs
NCBI-GeneID:
118114812
NCBI-ProteinID:
XP_035021400
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All DBs
Position
2:10332784..10344107
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AA seq
671 aa
AA seq
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MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFITAAVGGGGGAEAAARERTKHDHLNNNGDSAHSFT
DQEEGEEPEPSPDPHTQTSGTKLKPASSRSSGNGCLNCGATTGCAVGSGCKEEKASAPRD
KGLEHQAAGGCPEPGVGHGTSAHGDGSRATPSRSDAVCGGMEPGPSGAESQNKTYTGSVG
SLPQQQQRQPAPLKPKLRVGGGGTRAAGTHANSSDLGDRLVASVRRLSERSHRGGSAAAA
SSTATTRGHMKPLGLKEILGYLSSQEQLSEEKLTRGKVKVVMEREVARGRLRRTRCGNIT
LPLRGMVMVEEPASKKNASADRLGKSALQEKHTPTKKPPPSSPVQEHEPMETSSEEVERG
ENEEEEEEEDADDPRSSDEEGGPSPVAMTTEPGLTEKPAEDAEIQAVSKEGSPHQQQQHS
GKAALSGVDSLARTPSPPVQGVVEVLQCNGARLEERAYLPDQPHMAAQTQSQPQHDGINH
TSSGFNNMECMTEVGVSSCLLTPTASPRDSGLSEELGINGGVSSGGFMKCEGASGSPVDW
TVSDVVSYFTAAGFPEQAAAFMTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKV
LQKTHFEDDDC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaataagtaccgagagtggatcctggaaacaatcgactccctccgctcc
aggaaagcgcgtccagacctggagaggatctgtcgaatggtccggagacgacacgggtca
gacccggaccgaaccaggacagagctggaaaaactgatccaagagcagacggtgctcaaa
gttagctacaagggctccatatcgtaccggaacgcggccaaggtgcagaggaaaagccga
aagaagagtgagtttatcacggcggctgttggcggtggcggcggcgcggaggcagcagcg
agggagcggaccaaacacgaccatctgaacaacaacggcgacagtgcgcacagcttcacc
gaccaggaggagggagaggagccggagcccagcccagatccccacacccagacatcaggc
acgaagctcaagcctgcctccagccgaagtagcggaaacgggtgcctcaactgtggcgca
acaacgggctgcgctgtcgggagcggctgcaaagaagagaaagcaagtgcaccgagagac
aagggattagaacatcaggcagcggggggctgcccggagcccggtgtcggccacggaacg
agcgcgcacggcgacggcagcagggcgacgccgagcaggagcgatgctgtctgcggagga
atggagccgggtccgtccggagctgagagccagaacaaaacttacaccgggagcgtcggc
agcctcccgcaacaacaacagaggcagcccgcgcccctcaagcccaaacttcgagtcgga
ggagggggcacccgagcggcggggacccacgccaactcctccgacctgggcgacaggctg
gtggcttctgttcgccgcctgtccgagaggagccaccgagggggctccgccgctgccgcc
tcttccaccgccacgaccagaggccacatgaagccgctcggactcaaggagatcctgggc
tacctgagcagccaggagcagctgtcggaggagaagctgacccgaggcaaagtcaaggtg
gtcatggagcgagaggtggcgagaggccggctgcgcaggacccgctgcgggaacatcact
cttcccctgagggggatggtgatggtggaggagccggcgtcgaagaagaatgcgtccgcg
gacagacttgggaagagcgcactgcaggagaagcacacaccgacgaagaagccgccgccc
tcgtctcctgtccaggagcatgagccaatggaaacaagcagcgaagaagtggaacgggga
gagaacgaggaagaggaggaggaggaggacgctgatgatccccggagttcggatgaagag
ggaggaccatcgcctgtagccatgacaaccgaaccagggctcacggagaagcccgcagaa
gatgctgagatccaggcagtgtcaaaggaggggagcccccatcagcagcaacagcacagt
ggcaaagcggctctctcaggggtggattccctcgccaggacaccgtccccacctgttcag
ggagttgtcgaggtgttgcagtgtaacggtgcacgcttggaggagagagcttacctccca
gatcagccgcatatggcagcacaaacacagagccagccgcagcatgatgggatcaaccac
acctcctcaggcttcaacaacatggagtgtatgacagaggtcggtgtgtcgtcctgcctg
ctcacacccaccgcctccccgagagactccggcctgtctgaggagctagggataaatgga
ggcgttagcagtggagggttcatgaagtgtgagggggccagtggaagcccggtggactgg
acggtgtctgatgtggtcagctatttcacagcagcaggtttccctgagcaggctgctgcc
ttcatgacccaggaaatcgatggcaagtctctgctcctcatgcagcgcaatgatgttttg
actggcctgtcaatcaggctcggccctgccctcaagatctatgagcggcatgtgaaggtt
ctgcagaaaacacattttgaggacgacgactgctaa
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