Hippoglossus stenolepis (Pacific halibut): 118114822
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Entry
118114822 CDS
T08308
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118114822 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118114822 (sv2ca)
Transporters [BR:
hsp02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
118114822 (sv2ca)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
118114822
NCBI-ProteinID:
XP_035021413
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Position
9:complement(14405691..14435056)
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AA seq
732 aa
AA seq
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MEDTYNNRTSLVKGAKDIVKEAKRHATKKVGKAVNRATDEYSSHRNYSRFQDEEDEDEDF
YKNPPRQDGGGDNEEGSSDATEGHDDEDEIYEGEYQGIPSAGDSKHKDGQVALGQPVSDA
TRDRKELEQERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGFVL
PSAETDMCVPNSSSGWLGSVVYLGMMVGALFWGGMSDKVGRRQILLICMSTNGFFAFLSS
FVQGYGLFLLCRLAAGFGIGGAVPIVFSFFAEVLSREKRGEHLSWLCMFWMIGEIYASAM
AWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVGKHDEA
WMILKQIHDTNMRARGQPEKVFTVNRIKIPKQLDELVEMQSESGNPVSKFFFRIKAETQG
IYHNLMKCFNYPMRENMMRLATVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVKIHNNE
RIEDFTFNFTLENQIHKNGVFINDRFINMKLRSVTFIDSTFRNCYFDDVSSVGSFFRNCT
FIDTFFFNTDIYESKLIDGTEVINSTFTHNKTGCQMTFDDDYSAYWVYFINFLGTLAVLP
GNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISAWNSLD
VVTTESFPTARRGTGFGFCNALCKLAAVMGNLIFGSLVGITKAIPILMASSVLVGGGLVA
LRLPDTRENVLM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacttacaataacaggacttctctggttaagggggccaaggacatagtcaag
gaggccaagcggcatgcgacgaagaaagtaggcaaggcggtgaaccgcgcaacagatgag
tactcgtcccaccgcaactacagccgattccaagacgaggaggatgaggatgaggatttc
tacaagaacccgccgcggcaggatggagggggcgacaacgaggagggctccagcgatgcc
acagagggccacgacgatgaggacgagatctacgagggcgagtaccaggggatcccctca
gcaggagacagtaagcataaggacggccaggtggcgctggggcagccggtgtcggatgcc
acaagggaccgtaaggagctggagcaggagaggcaggctgatgaggaggagctggcccaa
cagtacgagctcatcatccaggagtgtggccacgggaggttccagtggcagctgttcctg
gtactcgggctggcactcatgtcagacggcgtggaggtgtttgtggtgggcttcgtgctg
cccagtgcagagacagacatgtgtgtacccaactccagctccggatggctaggcagtgtt
gtttacttggggatgatggttggcgcgctcttctggggagggatgtctgacaaagttggc
cgcagacagattctcctcatttgcatgtccacaaacggcttcttcgccttcctgtcgtct
tttgtccagggatacggcctgttcctcctttgccgtctcgccgcaggcttcgggatagga
ggtgccgtgccgatcgtcttctccttctttgcagaggtgttgtccagggagaaaagagga
gagcacctcagctggttgtgtatgttctggatgattggagagatctatgcatctgctatg
gcctgggccatcataccacactacggttggagcttcagcatgggctcagcgtaccagttt
cacagttggagggtgtttgtggtcgtctgcgctctcccctgtgtgtgtgctgtggtggct
cttaccttcatgcctgaaagccccagattctacctcgaggtggggaagcacgatgaagcc
tggatgatcctcaaacagatccacgacaccaacatgagagcgcgtgggcagccggagaaa
gtcttcaccgtaaacaggatcaagatccccaaacagttggatgaactggttgaaatgcaa
tccgagtctggcaacccagtatccaagtttttctttcggataaaggctgaaacacagggg
atctatcataacctcatgaagtgcttcaactacccaatgcgagaaaacatgatgcgtctt
gccacggtgtggttcacactgtcatttgggtattatgggctgtcagtctggttccctgac
gtcatcaaacaccttcaggcagatgactacgcctccaaagtgaagatccacaacaatgaa
cgcatcgaggacttcaccttcaacttcaccctggagaaccagatacacaaaaatggcgtc
tttattaacgaccgattcatcaatatgaagctaaggtccgtcaccttcattgactctact
tttcgtaactgctacttcgatgacgtgtcatcagtgggctcctttttccgcaactgtact
ttcattgatactttcttcttcaacacagacatctatgagtccaagttgatagacggcaca
gaggtgatcaacagcaccttcacccacaacaagacaggctgtcagatgacttttgatgac
gactacagcgcctactgggtttacttcatcaacttcctcgggaccctggctgttctgccc
ggcaacatcgtgtccgcccttctcatggacaaaattggccgactgtccatgttaggtggt
tccatggtgctgtcgggcatcagctgtttcttcttgtggttcggcaccagtgagtccatg
atgattttcatgttgtgcctttacaacggcctgagcatctctgcctggaactccctggat
gtggtcactactgagtcattccctactgccaggaggggaacaggcttcgggttctgcaac
gctctgtgtaagctcgccgccgtcatggggaacctgattttcggttcactcgtcggcatc
accaaggccatccccatcctcatggcctcgtccgtgctcgtcggtggaggcctggtcgca
ctcaggttgcctgacaccagggaaaatgttctcatgtaa
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