Hippoglossus stenolepis (Pacific halibut): 118114859
Help
Entry
118114859 CDS
T08308
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118114859 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118114859 (lsm1)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118114859 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
118114859 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118114859
NCBI-ProteinID:
XP_035021472
LinkDB
All DBs
Position
9:complement(9973189..9977401)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDMDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKVKMQVLKDR
GLSVPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccggggacggccagcctcatagacgacatcgacaagaagcacctggtg
ctgctcagagatggaagaacactgatcgggttcctcagaagcattgatcagtttgccaat
ttagttttccaccagacagttgagcgcatccacgtgggaaagaaatttggtgacatcccc
agaggaatattcatagttagaggagagaatgtggtcctgctgggagagatagacatggat
aaaccctgcgacacagtcctgcagcaggtttccatcgaggagattttggaggagcagcgg
ttgcagcaacaagccaaacaggagacggagaaagtcaaaatgcaggtcctgaaggaccga
ggcctgtccgtacccaaagctgacaacttggacgaatactaa
DBGET
integrated database retrieval system
