Hippoglossus stenolepis (Pacific halibut): 118114893
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Entry
118114893 CDS
T08308
Symbol
nipbla
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118114893 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118114893 (nipbla)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
118114893 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_HEAT
Nipped-B_C
HEAT
Cnd1
ARM_ECM29
Cnd3
Motif
Other DBs
NCBI-GeneID:
118114893
NCBI-ProteinID:
XP_047197223
LinkDB
All DBs
Position
9:complement(17637146..17662921)
Genome browser
AA seq
2395 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEYIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVPP
FKITQNPMHSPAQSTNFQPAAISPSPSSRFVSPSSGSSSRYMGQQNSPVPSPYTPQSPAP
GYIQQYPHQQPPSYNQHQQIQQVSVASPMVPGGIRNIHEGKVSGQMANAANHHSDRHGTE
DYLNIVHRLGSEEGDSAMRNTFPLRSPQSGCSPAGSEGTPKSGSRPPLILQSPPPYAPSP
REGGPDQKQQLQQRKKPPAVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNESDPGDMPGM
DQNSDNMEADLGFQQVPVLQQNLAARLQQISQHGGASGLQPPSSPYDEAELDALAEIERI
ERETASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKLTPQ
EATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGPAAVEGS
DTALRLKPDGRPEVIKNRVDKHDGRREGRDSSKHRHDEKSSDRRGEMPKSSNRGEHGRDR
DRESDRDRRHRSETGGRDRRSPDSRCRSDRDRSGFRASSTGEPGRSSNRQDGSKPASSAS
GVKLPDSFPAQLLGGHSGALKNFQIPKIKRDKDSSGSTEGQMWGQPKVKLERLGLVKDFE
KRPKPVVVLKKLSIDQIQRIIRHSKSGKNRISSGKSVKSGMDPAVLKELPPELLAEIEST
MPLCERVKMNKRKRSTVNEKPKYAEVSSDDDFDANGESARKRQRREKDRSWEFEERERRG
SGEHRKSGQREGRRGSGSRYRDSEEEESPPPSVSELARKIKMKEKQKKRKAYEPKLTQEE
LMDSSTFKRFLTSIDNILENLEDVDFTAMAADDDEIPQELLLGKHQLNELGSESAKIKAM
GISGRIPSDKLVKLLNILEKNIQDGSRLTTLMNHDHDAEDEEKLWRDLIMERVTKSADAC
LTALHIMTSSHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAK
RAKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQ
LCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQMVT
ALVLQLIQCVVHLPTDKDAFEEYDTKVDQDLLITNSYETAMRTAQNFLSVFLKKCGSKQG
EEDYRPLFENFVQDLLSTVNRPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLG
TVAARLRKDAVTSKMDQRSIDRILQQCQGNDETQQLQKALLDYLEQNAETDASLVFARKF
YIAQWFRDATTEAEKSMRNPHPKDEDSSDGPQHAKELESTGEIMQRAEKRKKFLRNIIKT
MPSHFTTLKMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAM
KCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDML
IERILDTGISVRKRVIKILRDICLEQPTFSKITEMCIKIIADLNLXHTIFYYSXKLVNET
FQKLWFTPTPAHDKETMTRKILNITDVVSACRDTGYDWFEQLLQNLLKSEEDASYKPAKK
ACVQLVDNLVEHILKYEESLSDNKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYL
TTKCNTANDFMVICNVAKILELVVPXMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSC
LGAVVNKVTHNYKFVWACFNRFYGALNKLKVQHHEDSNSATLVANKPFLLRSLFTVGALG
RHFDFDLEEFKGTNKVVIKEKVLELLLYFTKHEDEEVQTKAIIGLGFLVIMHPSQMFVPE
VKTLYNGILADRASSINLKIQILKNLQTYLQRRTYRRPAHRTFLISLLNLYDDSSKTEVN
MLLFVADNLACFPYQSQEEPLFIMHHIDITLSVSGSNLLQTFKELLLKEPKRKKKVKKEC
KNTTDGEDGEEKMNCDSPRSDDRENGNSNDDDNDGEDVVRRPKKPRKPVAPVASESESDL
EDLDVDDAEKVMRLLPDNPGSLLDFANAVQGILLLLVLKQHLKNQYGFSDSKIQKYSPTE
SAKVYDKAVNRKNNVHFHPRQTIDFISNNMAHASLTEDVKKRIVKQYLDFKCLMEHLDPD
EEDEEGEASASANIRNKAINALLGGSGPMSGPSPRNQAGPETDDDYSDGDERTPGSSRKS
RRAVDPSDPGRMNETVDAMDVIALCCPKYKDRPQIARVVNKTSSGYSIHWMAGSYSGPWA
EAKKRDGRKLVPWVDTIKESDIIYKKIALTSNHKLSNKVVQTLRSLYAAREGGAS
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactctcgctgggatcgctagcttaaca
gacttgttgaaccagctacccctcccttcccctctcccggccaccaccactaagagcctc
ctatacaatgggaggatcgcggaggaagttacctgcctgctgggctgtcgggatgagaat
ctggcctcccagctagcccatggcctcaaccaggtgtccacagagtacatagagctgaag
gacaacctgggtagcgatgagccagagggagatgcaccactgttgctgcagaccatgctg
gccaggaaccctggcatcttcagggagaaaaatgtgatgcagcagccaatggtaccaccg
ttcaagatcacccagaatcccatgcatagccctgcccagtctacaaacttccagccggct
gcaatttctcccagtccgtcaagtcggtttgtttcaccttcgagtgggtccagtagccgg
tacatgggccagcagaacagtccagtacccagcccctacactcctcaaagccccgcccct
ggttacatacagcagtatccccaccaacaaccacccagctataaccaacaccaacagata
caacaagtgtctgtagccagtcccatggttcctggtggcatacgaaatatccacgagggc
aaagtatcggggcagatggccaatgctgccaaccaccactcagacagacatggcactgag
gactaccttaacattgtacaccgactgggcagcgaggagggtgactctgccatgaggaat
actttccctctgaggtctccacagtccggctgctccccagcagggagtgaaggaacgccc
aaatcgggttctcgccccccactgattctgcagtcaccacctccctatgcaccctcaccg
agggagggaggccctgaccagaaacagcagctccagcaaaggaagaaacccccagcggtg
aaagaggagaaggacatgtacgatattgtcagctcgccaaacaaggactcgacaaaactc
accctcaaactgtcccgggtcaagtcaaatgagtcagatccaggtgacatgccaggtatg
gaccagaactcagacaacatggaggcagacctgggctttcagcaggttcctgttcttcag
caaaacctagcagcccggctgcaacagatctcccagcacggtggtgccagtggtctccag
cctcccagttccccttacgacgaggcggaactggatgccctcgctgaaattgaaaggata
gaaagagaaacggctagtgagaagtgctccaaggaagtgcaggataaagacaagcctctg
aagaagagaaaacaggactcctttccgctggagccaggcgcaggcggaccaggtggaccc
acaggtgccccaggaagtggatcaacaggcggaggaaatgctggcaaactgaccccccaa
gaggccactgcagctgggaacggtgccagccgtcctcccctcatggtgagcatcgaccta
cagcaggcaggccgagctgatggccagcttgacccctgtttggctgcccctattccagct
cttgaggcccaacgctggccggaagaaccagctagtgggccggctgctgtggagggttct
gacacagctttacggttgaaaccagacgggcggccggaagtcatcaagaacagggttgat
aaacatgacggcaggagagaaggtcgggattcatcaaagcaccgacacgatgagaaatcc
tctgacaggcgaggagagatgccaaagtcatcaaaccgtggggaacacggacgagacagg
gaccgagaatctgacagagataggaggcatcggagcgagactggtggtcgagaccgacgc
tctcccgactctcgctgccgcagtgacagagataggtcgggcttccgggcttcttccact
ggagagcctggtcggagcagcaataggcaagatggttccaaaccagcctcgtctgcttct
ggtgttaaacttccagattccttccctgctcagctcctgggagggcatagtggcgcgctg
aagaacttccagatccctaagatcaaacgggataaggatagcagtgggtcaactgaaggt
caaatgtggggccagcccaaggttaaactggagcggcttggtttggtgaaggactttgag
aagaggccaaaacctgttgtggttctaaagaagctctccatcgaccagattcagaggatc
atccggcacagcaagtctggaaagaacaggatctcatcaggaaagtctgttaaaagtggt
atggacccggcagttctgaaggagctgcctccagagctgctggcagagatcgagtcaacc
atgcccctgtgtgaaagagtaaagatgaacaagaggaaacgaagcactgtaaatgagaag
cccaaatatgctgaggtcagctcggacgacgactttgacgcaaacggagagtctgcaagg
aagcggcagcgcagagaaaaagaccggtcctgggagtttgaagagagggagcgccggggc
tcaggggaacatcggaaaagcgggcaaagagaaggtcggcgaggctcaggcagtcgctac
cgagactccgaagaggaagaatcgccgcctcccagcgttagtgaacttgccagaaaaatt
aagatgaaggagaagcagaagaaacggaaagcgtatgaacccaagctgacccaagaagag
ttgatggactcgtccactttcaagaggttcttaacaagtattgacaacatcctggagaat
ctggaggatgtggatttcactgccatggcagcagatgatgacgagataccgcaggagctg
ctgctcggtaaacaccagttgaatgagctgggcagcgagtctgccaagattaaggccatg
ggcatctccggcaggatcccatcagacaagctggtgaagctattaaacatactggagaag
aatatccaggatgggtccaggctcaccaccctgatgaaccatgaccatgatgctgaggat
gaggagaaactttggagagacctgataatggagcgagtcacaaagtcagcagacgcctgt
ctgacagctcttcacatcatgacctcatcacacatgccgaaggctgtctacatagaggac
gtcatcgagcgggtgttgcaatacaccaagttccatcttcagaacacactgtatccacag
tatgacccagtctacagggtggacccacatggaggtggcttgttgagctccaaggcaaag
cgtgcgaaatgctccacacataagcaacgagtgatcgtcatgttgtacaacaaagtgtgc
gacatcgtcagcaacatttctgagctcctagagatccaactgcttactgacaccaccatc
ctccaggtttcttctatgggaatcactcctttctttgtggagaatgtcagcgagctgcag
ctgtgtgccattaaactagttacagcagtgttctcgcgttatgagaagcatcggcagctg
attttggaggagatcttcacctctttagccagactgcccaccagcaaacgctccctcagg
aatttcaggctgaacagctcagaccaagatggcgagccgatgtacatccaaatggtgacg
gccctggtgctgcagctgatccagtgtgtggttcacctccccaccgacaaggacgctttc
gaagagtatgacaccaaggtggatcaagacctgttaataaccaactcgtatgagacggca
atgagaacagcacaaaacttcctctcagtcttcctcaaaaagtgtggcagcaagcaggga
gaagaagattaccggccgttgtttgagaactttgtccaggatctgctctcaacagtgaac
aggccagagtggcctgctgcagagctgcttctcagtctgcttggtagactactggtccac
cagttcagtaataaacagacagaaatggctctgagagtagcttctctggactacctgggc
acagtggccgcccgtctgaggaaggacgcagtcaccagcaagatggaccagagatcaatt
gatcggattctacaacagtgtcaaggtaacgatgagacccagcagctgcagaaagcccta
ctggactacttggaacagaatgctgagacagatgcttcactggtgtttgctcgaaagttc
tacattgcccagtggttccgtgacgccaccacagaggctgagaagtccatgaggaacccg
catcccaaggatgaggactcatcggatggaccacaacacgccaaggagctggagagcacc
ggtgaaattatgcagcgtgctgagaagcgcaaaaagttcctgcgcaacatcatcaagacc
atgccttctcatttcacaacactgaagatgaactctgacactgtggactatgatgactct
tgcctgatcgtgcgttatttggcctccatgaggccgttcgcccagagctttgatatttat
ttaacacagatcttgcgagtccttggggaaagtgccattgctgtgaggactaaagccatg
aaatgtctgtctgaggtcgtggctgtggaccccagcatactggcaaggtctgacatgcag
cgtggggtccatggtcgtttgatggacaactccaccagtgtgagagaggcagctgtggag
ctgctcggcaaattcgtcctcagcagaccccaactcactgaacagtactatgacatgctc
atagagaggatactggacactggtatcagcgtaagaaaacgggtgataaagatcctcaga
gacatctgtctggagcagccaactttcagtaagattactgagatgtgtatcaaaattatt
gcagatctcaacttgtgacacacaatcttttattattcatagaaattggtgaatgagaca
ttccagaagttgtggttcactccgactccagcccacgacaaagagaccatgaccagaaag
atcctgaacatcaccgatgtggtctcagcgtgtcgagacaccggctacgactggttcgag
caacttcttcagaatcttctcaagtctgaagaggacgcatcatacaaaccagccaaaaag
gcctgtgttcagctagttgacaatctggtagaacacatcctcaaatacgaggagtctctt
tcagacaacaagggtgtaaactcaacacggctggtggcgtgtatcaccaccttgtacttg
ttcagcaagatcagggcccagcttatggtcaaacatgccatgaccatgcaaccctacctg
accacaaagtgtaacactgccaatgactttatggtcatctgtaacgtggcaaagatcttg
gagcttgtggtacccntgatggagcaccccagtgaaactttccttgccaccatcgaagaa
gacctcatgaagctcatcatcaaatatggcatgactgtggtccagcactgtgtgagctgt
cttggagctgttgttaacaaagtgacacacaactacaagtttgtctgggcttgcttcaac
agattttatggtgcacttaacaagcttaaggttcagcatcatgaggattctaacagtgca
acattagtagcaaacaagcctttcctgctgcgatcactcttcactgtgggtgccctgggc
cgacactttgactttgatctggaggagttcaagggcaccaacaaggttgttattaaggag
aaagttctcgagctgctgctatacttcaccaaacatgaggacgaggaggtccagaccaaa
gccatcatcggcttaggcttccttgtgatcatgcatcccagccagatgtttgtgcctgag
gtgaagacattgtacaatggcatcctggctgacagagcttcctccatcaacctcaaaatc
cagatcctcaaaaacctccagacataccttcagaggaggacttacagaaggccagcacac
cgaacctttctcatctcactgctgaacctctatgacgacagttctaaaacagaagtgaac
atgctgctgtttgtagcagacaacctcgcctgtttcccataccagagccaggaggagcct
ctcttcatcatgcaccacatagacatcaccctgtctgtgtctggcagcaacttgctgcaa
accttcaaagagcttttgttaaaggagccgaagcgtaagaaaaaggtaaagaaggaatgc
aagaacacgacagatggggaggatggcgaggaaaagatgaactgtgactctccaaggagc
gacgacagagaaaacggcaacagcaatgatgacgataatgatggcgaagatgtggtacgg
cggcctaaaaagcccagaaaacctgttgcaccagtggcctcggagtccgagtctgatctg
gaggatctggatgtggatgatgcggaaaaagtaatgaggctcctcccagataaccctggc
agtctcttggactttgcaaacgccgttcagggcatcctgttgttgctggtgctcaaacag
catctgaagaaccagtatggattctctgacagtaaaattcagaagtactcaccaactgag
tcagccaaggtgtacgacaaggcagtcaacaggaaaaacaacgttcacttccatcctcgc
caaaccattgacttcatctccaacaacatggctcacgcctcactgacagaagatgtcaag
aagcggatagtcaaacagtacctagacttcaagtgtctgatggaacatctggacccagac
gaggaggatgaggagggagaagcgtctgccagcgccaacatcagaaacaaagccataaac
gccctactgggaggctccggccccatgtcaggacccagtccgcgcaatcaggcaggacca
gagacagatgatgattatagtgatggtgacgaaaggaccccagggtcctctcgaaagtca
aggcgagcggttgacccctcggaccccggccgcatgaacgagacagtggatgcaatggat
gtgattgccctttgctgccccaaatacaaggaccggccacagatagctcgagtcgtcaac
aagacctccagtggttacagcatccactggatggcaggctcctactcggggccctgggca
gaggccaagaaacgcgatggccgcaaactggtgccttgggtggacactattaaggagtcg
gacatcatttacaagaaaattgccttgaccagcaaccacaaactgagcaacaaagtagta
cagactttacgctcactgtatgcagcgcgggaaggaggggccagctaa
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integrated database retrieval system
