Hippoglossus stenolepis (Pacific halibut): 118114910
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Entry
118114910 CDS
T08308
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118114910 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118114910 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118114910 (pdlim5a)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118114910
NCBI-ProteinID:
XP_035021560
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Position
9:complement(17482614..17543217)
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AA seq
455 aa
AA seq
DB search
MSSNYSVTLLGPAPWGFRLQGGKDFNMPLTISRLTAGGKAAKASIAVGDLVLSIDGITTE
GMNHLEAQNKIKNSADNLSLTLQKASSVPKPPAVAPKTAARPQVTNGPQSILKLSRKPQA
PRVPRKHVVETDIHFYHVPTHADASRKRITEDTEDWRPRAGTTQSRSFKILAQITGTEHA
QDEEAEKAQKANEDVGEPQLNSHETAVVKTMIKVPAASHGQRPRTSLILPSFGMKGNGSA
SVPRAPVPARPVPQPHPTDEDTLVQMAEHIPAGTRTPMCGHCNQVIRGPFLVALGKSWHK
EEFNCAHCRTSLADIGFVEEQGCVYCEHCYEDFFAPTCSRCQAKILGEVINALKQTWHVH
CFQCACCQQPIRNNTFHLEDGEPYCEQDFYNLFGTGCHGCEFPIEAGDKFLEALGFTWHD
TCFACAVCCTTLEGQTFFSKKDKPLCKKHAHTIKI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagcgtcactcttttaggccccgccccctggggcttcaggctgcag
ggagggaaggacttcaacatgcccctcaccatctccaggctgacggctggtgggaaggcg
gctaaagccagcattgctgtcggtgacttggttttgtccattgacggcatcaccacggag
ggcatgaaccacctggaggcccagaacaagatcaagaacagcgctgacaacctcagcctc
accctgcagaaggcctccagtgttcccaaacctccggctgtggctccgaagactgcagca
cgtcctcaagtcacaaatggacctcaaagtatcttgaagctttcaagaaaacctcaggcc
ccaagagttcccaggaagcatgttgtggaaacagacatccatttttaccacgtgcccacg
cacgccgacgccagcaggaagcgcataacggaggacaccgaggactggcgcccgcgcgcc
ggcaccacccagtccagatccttcaagattctggctcagatcactggcaccgagcacgct
caagatgaggaagcggaaaaggcacagaaggcaaatgaggacgttggcgagcctcaactc
aacagccacgagactgcagttgtcaaaaccatgattaaagtacctgctgcaagccacggt
caacgcccgcggaccagtttgatccttccgtctttcggtatgaagggtaacggcagtgcc
agtgtcccgagggctcctgtcccagcccgacctgtacctcagccccatcctacagacgaa
gacaccctggtccaaatggccgagcacattcctgcagggactcgtacgcccatgtgtggc
cactgcaaccaggtcatccggggaccctttttagttgcactgggtaaatcgtggcataag
gaggagtttaactgcgcccactgccgcacatccctggcagacataggcttcgtggaggag
cagggatgtgtttactgtgaacactgctatgaagacttcttcgctccaacatgcagccgc
tgccaggccaagatactgggggaggtgatcaatgccctcaagcagacgtggcacgtgcac
tgctttcagtgcgcttgctgtcagcagccaatccgaaacaacaccttccatctggaggat
ggagaaccgtactgtgagcaagatttctacaatttgtttgggactggatgccatggctgt
gagttccccatcgaggctggagacaagttcctggaggccctcggtttcacctggcacgac
acctgctttgcctgtgctgtgtgctgcaccacgctggaaggccagaccttcttctccaag
aaagacaaacctctctgcaagaaacatgctcacacgatcaagatttaa
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