Hippoglossus stenolepis (Pacific halibut): 118114934
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Entry
118114934 CDS
T08308
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118114934 (trmt2a)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118114934 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_4
Methyltransf_11
MTS
Methyltransf_15
Ubie_methyltran
PrmA
Cons_hypoth95
RRM_1
Methyltransf_23
Methyltransf_32
N6_N4_Mtase
TRM5-TYW2_MTfase
CMAS
Methyltransf_12
Methyltransf_18
RrnaAD
FtsJ
RRM_PARP14_3
TPMT
UPF0020
mRNA_G-N7_MeTrfase
Motif
Other DBs
NCBI-GeneID:
118114934
NCBI-ProteinID:
XP_035021590
LinkDB
All DBs
Position
9:complement(6819762..6825341)
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AA seq
616 aa
AA seq
DB search
MADVSDSPLADTPPSKEETPDVLPQDSSTDGVKSDVKAGEDESEAASDVYRYIKEDLFTS
EIYKVEIRNLPKFVGFNDLKKFLARHGLNPHKIKLFGKHLFAFVTFMNEEERDKAMKMVH
GMLWKGQVLSVRLAKPKADPILKKRRQEEEGEGAGGQPPSKRAEGDQEEEPLSVQIANVV
TPLWNVPYEEQLRRKEQEVVGVLQRLAKEIGSTNKAMLPWLFAQKGKYNKMCCPLEAIQP
SPTQTGYRNKCEFLISVGADGEDKTIGFRLGKYKGGSCAVVGPAETCHVSAEAKRVVCEF
QKFIRTTPYSVYSPETYEGHWKQLTVRTTRTKQAMAVVFFNPQKIEEEELNALKSSMKEH
FTEGEGKASGVTSLYFVREGQRKSPNPEDLPCELVAGESCIHEELLGLKFRISPHSFFQV
NTGAAEVLYSTVGEWAQLDQDSTVLDVCCGTGTIGISLAKRVKKVIGIELCQEAVEDAKV
NTKVNGLSNVEFHCGKAEDVLPNILNALVSPSVTAIVDPPRAGLHSKVILAIRRAQHLKR
LIYVACNAKAAMANFIDLCRAPSNRVHGAPFRPVRALAVDLFPQTMHMEMILLLERVDYE
PQKQQSSSSNQEQTAS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtaagtgacagcccactggctgatacgcccccctcaaaggaagagacacct
gatgtcctcccccaggactccagcactgatggtgtaaagtctgacgtcaaagctggggaa
gatgagagcgaggcggcctctgacgtgtaccgctacatcaaagaggaccttttcacgtcc
gagatctacaaagtggagatcaggaatctgcccaagttcgtcggcttcaacgacctgaag
aagttcctggccaggcacggcctcaacccgcacaagatcaagctgtttggcaagcacctg
ttcgccttcgtcacctttatgaacgaggaggagcgtgacaaggccatgaagatggtgcac
ggcatgctgtggaagggccaagtgctgagcgtcaggctggccaaacccaaagctgacccc
atcctgaagaagaggaggcaggaggaggagggagagggcgcgggagggcagcccccatcc
aagcgggcagagggcgaccaggaagaggagccgctcagcgtccagatagccaatgtggtg
actcctctgtggaatgtgccttatgaggagcagctgaggaggaaggagcaggaggtggtg
ggggttctgcagaggctggcaaaagagattggaagcaccaacaaagccatgctgccgtgg
ctctttgcacagaaagggaaatacaacaaaatgtgttgtcccctggaagctattcaacca
tctcctacacagaccgggtacagaaacaagtgtgagttcctcatctcagtcggggcagac
ggtgaagacaagaccatcggtttccgtctggggaaatacaaaggaggctcgtgtgctgtg
gtggggccggcagagacgtgtcatgtctcagccgaggccaagagagtggtctgcgagttt
caaaagtttattaggacaacaccgtactctgtgtacagtcctgagacgtatgagggacac
tggaagcagctgactgtacgaacgacgaggaccaaacaagccatggctgtagtgttcttc
aacccacagaaaattgaagaagaggagctcaacgctctgaagagctccatgaaggagcac
ttcaccgagggagaggggaaagccagcggcgtgacctctctttactttgttagagagggt
caaaggaaatcccctaacccagaggacttgccctgtgagctggtagctggagagagctgc
atccatgaagagctgctgggtctaaaattcagaatatcccctcactccttcttccaggtg
aacacaggagctgcagaggtgctgtactcgactgtgggggagtgggcccagctggaccag
gacagcacagtactggacgtgtgctgtggcacagggaccattggcatctctctggcgaag
agggtaaagaaggtgattgggatcgagctgtgccaggaagcagtggaggatgccaaagtc
aatacaaaagtcaatggactaagtaatgttgaatttcactgtggtaaagcggaggacgtg
ctccccaacattctcaacgctctcgtctcacccagtgtcacggccatcgtggatccaccg
agggcgggactacattccaaggtgattcttgccatccgtagagcacagcacctgaagagg
ctgatttacgtggcgtgcaatgcaaaggcagccatggccaacttcatcgatctgtgcaga
gcaccgtccaacagagttcatggagctccgttccgtccggtgcgagccttggccgtggac
ctgttccctcagaccatgcacatggagatgattctgctgctggagagagtggactacgaa
ccccagaagcagcagagcagcagcagcaaccaggaacagactgcttcttag
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