Hippoglossus stenolepis (Pacific halibut): 118114948
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Entry
118114948 CDS
T08308
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118114948 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118114948 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118114948 (usp30)
04121 Ubiquitin system [BR:
hsp04121
]
118114948 (usp30)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118114948 (usp30)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118114948 (usp30)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
118114948 (usp30)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118114948 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
118114948
NCBI-ProteinID:
XP_035021627
LinkDB
All DBs
Position
9:complement(15602859..15608492)
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AA seq
500 aa
AA seq
DB search
MFRCRPESSDKLVGEFLGTGRVVRNKMIKNWGVIGGIAAAIAAGVYVLWGPITERKKRKN
GMVPGLLNLSNTCFLNSLLQGLAACPSFVRWLEKFSDSPMIQSCKDNHLSNTLLQLLKAL
SCDEPGSEEVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVTHLF
DMQSLESLPDQDDNSMTCRSRAPLHPIPSPWKCHHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQESAAIGQVLESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSSEGAPIKKQEHVQFTEYLTMDHYKHKVPMQRNKRLT
CAPKPKKAENTDDVTSNGTDAEHHNNNNKPFSNGTCSSLFLHSPGVNPQLGLMYDYSSTE
YLFQLTAVLVHHGDMHSGHFVTYRRSPSSPRSSSPLSSQWLWVSDDSVRKASLHEVLSSN
AYMLFYERVRRLNLALRSEE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggtgcagacctgaatcctctgataagctcgtcggggagtttcttggcactgga
cgcgtcgtcagaaacaagatgattaaaaactggggtgtcatcggtggaatagctgccgcg
attgcagctggagtctatgttttgtggggcccaataacagagagaaagaagagaaagaat
ggtatggtacctggtctgttgaacttgagcaacacctgcttcctcaactcgttgcttcag
ggtttggcggcatgtccgtctttcgtcaggtggctggagaagttttccgattcgcctatg
atccagtcgtgcaaagacaaccatctgtctaacacgctgcttcagctactcaaagctctg
tcctgtgacgaacctgggtcggaagaagtactcgatgccggatgcctcctggatgttctc
agactgtaccgctggcacattagttcatttgaagagcaggatgcacatgaactttttcat
gtcctcacatcttctctggaggaggaacgggatcgtcaacccaaagtcactcacctgttc
gacatgcagtccctcgagagtctccctgatcaagatgataattctatgacctgcagaagt
cgagccccacttcatccaataccaagtccttggaagtgccatcatccttttcatggccgt
ttaacgagcaacatgtcttgcaagcgctgtgagcaacaaagtccggtgcggtatgactca
tttgagagtctctccctgtccatccctttacctcagtggggtcgacctatctctctcgat
cagtgtcttcagcatttcatctcctcagaaaccatcaaagaagtggagtgtgaaaactgc
acaaagcttcaacaagagtccgcagccatcggacaagttctggaaagtcagagaacaaca
tttgttaaacagctaaaattgggaaagctcccccagtgcctctgcatccatttacaaaga
ctgacgtggtccagtgaaggagcccctatcaaaaaacaggagcatgtgcagttcacagag
tatctaacgatggaccactacaaacacaaagttcccatgcagagaaataagcggctcaca
tgtgcaccaaagcccaagaaagcagaaaatacggatgatgtcacctccaatggcacagat
gcagaacatcacaacaacaacaacaaacctttttccaatggaacctgttcatctttattt
cttcactctcctggtgtgaacccacagctcggcctcatgtatgactacagttctacagaa
taccttttccagctcacggccgtgctggttcaccacggggacatgcactcgggacatttc
gtcacgtaccgccgcagcccctcctcgcctcgcagctcttcgcccctcagctcccagtgg
ctctgggtgtcggacgactcggtgcgaaaagccagcctgcacgaggtgctgtcttccaac
gcttacatgctcttctacgagagagtgcgaaggctgaacctcgctctgcgctccgaggag
taa
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