Hippoglossus stenolepis (Pacific halibut): 118114964
Help
Entry
118114964 CDS
T08308
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118114964 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118114964 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118114964 (clip1a)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118114964 (clip1a)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
118114964 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Rod_CreS
MGT5A_N
Motif
Other DBs
NCBI-GeneID:
118114964
NCBI-ProteinID:
XP_047197251
LinkDB
All DBs
Position
9:16564165..16591426
Genome browser
AA seq
2246 aa
AA seq
DB search
MSTAKASGIKGPSKIARPPGTGAPKTNPSAGAKVAADKSAAIASGGDAQNAEESFQVGER
VWVNGNKPGCIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTRPSK
LSGTEGESNGTLTEPPSRATSPTPSVDSVASHTPAAKSMMPSTTPAAKKPSTTTPATPAT
PATPATPATNLVRTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFA
KGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRK
VVATPSGLKRSPSASSISSMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKE
KQQHIEQLMGERDMERAEVIKATSHVGEMEQEINLLRDDHEQMETKMDQLRTLVEAADKD
KVELLNQLEEERRKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKL
QRELEDTRVASVSERSRVMYLERDLTLRTREVADLQLRLGTEPGSGDSTLSPLLEEIHSL
RDQLAAQEAKQQEELTTYKEKQDAQEKIHSKEVAQLQATSVRLSGENEQVQMRLSQAEKE
NADITELWRSKLESSVASHQQTLEELKVSFSKGAGAQTEELVETKSALETLKLEHKLAVE
EAGAKHDANTAAWTQETRALKAQLLSLTEDKERLEELVRSSVDKTEEQHLVEMEDVLGKL
HTAELRVKELEEKEEVLAQQAQDKDRQTKDQMAEVVALRSKIAQGSQEVVTLKSQLEKVQ
SQENHQGSKVSELSSQLEGQQKEVLSLQQTLTTVKQDNDTLEQELGGLKQKLAESTEEQT
KSAKSMQETLEKLNKKEEQCTSLTTESESLRSQLAGLERKLNAADEKLEQLSKDKSKLEK
DISEVMTASGDSSVQLTKMNEDLIQKERRLEEFQSQLAEEKEKVAHLDEKLQQELSRKEQ
ELKESNDAHNSQMKDLQEKIDSLEKTAKQGATLVGELKASQEKSLSEASELHVKELDVLQ
SQVETLKQELSSSKDKTQELKKLVSELQPYKEQAQCLSAELDTCKHDVEQLSKKLEKQSL
DLEKVCKESEDVKAVRGKLETQLSDLQTKLSALEVTHQELSLRNEELLKTRDELSKRQEE
LLTNNKRSDEERVVLNKELEKLRDLLQQVQTENKNLTRTKGEKIAQIEELQKQNAEKNDL
LLKHQQDIEQLQAKKKQLLEDYEKVCKERSRLEEDANESRSKLTCEKDDLILERDAARNA
KKSLDAKNAELQEKLKSLNLEKEDLTMKNTQLQALTETLTKEKVEMSSEISASVCDKKNL
ETVKEELQNKLAVTKKDLETSIRECEELKASKRSLSQMLEEFKTSSQVTDSERVHLLQEK
ENLLAIQRKVCNEKEELLREMEEIKEKLQTSTEQQFQANEKFKEVSSSFEQERQVFRLQN
SETEMSLHAIRKEKMSLDSALEQQKMDYERLAGEKGELEEKQTKALSEKSLLSLERDKLA
SDVRLTKDEMDSYSRSNADLIQEKSHLSTLLEENKRQKDEVEAEVTSLKREKAELQNELQ
KQNSDIENLEKGKRELVQEHGKLKMDFEKTNLELVQQLDNLTKNGHRLQSLQTEADKKVQ
SLQKENQGLLQEIQEFKAQTESMADAKQLLETQLQAESGERTKEMSHKDGLSKQIDELQK
TLSKATQENKQISSNLKNADEQNQSFIVDKEALETQLKQREKETSHLTEDKEQLLSKLEE
MGKQMTLLTTEKEDLLAAQCKVEQDVSSLHANKENWLTERSRLLEELEKLQVSQKQLEVD
VKALQTDKEVLDKQYRNAVAEVSASAAVKEEISSSVSGLTAQKNSLQVERDEAIQEVRQL
ESQLKNVISKQLEATEASGTTAEALEQLAKEKASLIQEKNEATSLLVELRSSQKETDTQL
ETLKKENSKHQEDLKVSKDQLHTESQKIKSLCKEIEEHKEAVSVKSQSLQTLQDENNKLT
QELDNKHRDQSDVSKLKDGQTKLKKQLGQLKQSLPINAFSESTLKEQLDKEKAALQQSVH
KNSALISEKDQQVENLRSELTALRGESVSAKALQGTIQALERDKANLQERVQRLEKDLAA
GPENINHSSGDAASDQSREDKDTADSQAAIEFLNSVIVDLQKKNKELKDKLEKMAEAALN
GNNRSELDNYDGNGQEPVKKKVPPRLFCDICDCFDLHDTEDCPTQMQMPDSPPHTTYHGC
KEDRAYCDICEVFGHWTESCTDDQTF
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagctaaggccagtggaatcaaagggcccagcaagatagccaggccacctggg
acaggagcccccaaaaccaaccccagcgcaggagctaaagttgcagctgacaaatcagct
gcaattgccagtggaggagatgcccaaaacgctgaggagagcttccaggttggggagcgg
gtatgggtgaacgggaataagccaggctgcattcagtttttgggagagacacagtttgcc
ccagggcagtgggctgggattgttctggatgagcccattgggaagaatgacgggtcagtg
gcaggggtgcgctacttccagtgcgaagccctgcgaggtatattcacccgcccgtccaag
ctgtctggcacagagggggagtctaatggaactctgacggaaccgccttcccgcgccaca
tcacccacgccttccgttgatagcgtagcctctcatacacctgccgcaaaatccatgatg
ccctctactaccccagcagccaagaagccctccaccactacaccagcgacaccagctacg
ccagcgacaccagctacgccagctacaaaccttgtgcgcacaaacagtgaatctgtctcc
aacctctcagagacgggatcagtcaagaagggggaaagggaactgaagatgggcgaccgt
gtactggttggtggtacaaaggcaggggtggtacgtttccttggagaaacagattttgcc
aaaggcgaatggtgcggtgtggagttggacgagcctttaggaaagaatgacggggcagtg
gcaggcacaagatattttcagtgccaacccaagtatggcttatttgctccagtgcacaaa
gtcacgcgcatcggcttcccctccaccacgccagccaaagcaaaaactacagttcggaaa
gtagtggccacaccatcagggctgaagagaagccccagtgcctcctccatcagtagcatg
agctccgtggcatcctctgtcagcgccaaacctagccgcacaggcctgctgacagagaca
tcatcacggtataatcgaaagatttctggcactacagccctgcaggaggcattgaaggag
aagcagcaacatattgagcagctcatgggtgagagggacatggagagagctgaggtcatc
aaggccacaagccatgttggagagatggagcaagaaattaacctgctcagggatgaccac
gagcagatggagactaagatggatcagttacgcaccttggtagaagctgcagacaaagac
aaagtggagctactgaatcagctggaggaggagcgtaggaaagtggaggaccttcagttc
cgtgtagaagaagcttgtattaccaaaggagatctggagacgcagaccagactggagcat
gcccacattaaggagcttgaacagagcctgctctttgaaaagaccaaagctgagaaactc
caaagagagttagaagacactagggttgcttctgtgtcggaaagatcccgtgtaatgtat
cttgagagggaccttacactgcgtacaagagaggtagctgacctgcagctgcgcctggga
accgagccgggctctggggactctactctttctcctctcctggaagagatacactctctg
agggatcagttggctgcccaagaagccaaacagcaagaagagctgactacatacaaggag
aagcaagatgctcaagagaagatccacagtaaggaagttgctcagcttcaggccacatct
gtgaggctctctggtgaaaacgaacaggtgcaaatgcgcttaagccaagctgagaaggag
aacgccgacatcactgaactgtggcgttccaagttggagtcttctgttgcctctcaccag
caaaccctagaggagttgaaggtgtccttcagcaaaggtgcaggtgcccagacagaagag
cttgtagaaaccaaaagtgcacttgagacactgaagttagagcacaagttggctgtggag
gaggcgggagccaaacatgatgctaacaccgcagcttggactcaggagacacgggcactg
aaagcacagctgctgtctttgacggaagacaaggagcgactggaggagttggtacggtcc
agcgttgacaaaacagaggagcagcaccttgtggagatggaggatgtccttggaaagctt
catactgccgaacttagggttaaggagcttgaggagaaagaagaagtgttggcacaacag
gcccaagacaaggacagacagaccaaagaccagatggcagaagtggtggctctgcgcagc
aaaattgcacaaggtagccaggaggtggtgaccctgaagagtcagttagagaaggttcag
agccaagaaaaccaccagggttccaaggttagtgagctgagctctcagttggagggtcaa
cagaaggaagtcctctctttacagcagactctgaccactgtgaagcaggacaacgacacc
cttgaacaagaacttggaggcttgaaacaaaagttggctgaaagcacagaggagcagaca
aaatcagctaaatctatgcaagaaacccttgagaagcttaataagaaggaagagcagtgc
acatccctgaccacagagtcagagtctctgagaagtcaactcgccgggctagagaggaag
ctgaatgctgcagatgaaaagctggagcagctttcaaaagacaaaagcaagctggaaaag
gacatttcagaagtgatgacggcatctggggacagctcagtacaactgaccaaaatgaat
gaagacctcatacagaaagaaaggaggcttgaggagttccagagtcaacttgcagaggag
aaggagaaggttgcacacttggatgaaaaactccagcaggaactctcccgcaaagagcag
gagctgaaagagagcaacgatgcacataactctcagatgaaagaccttcaggaaaaaatt
gatagcttggagaagactgctaaacagggtgcgaccctggttggggagctgaaggcctct
caagagaaatccctctctgaggcctcagagctccacgtgaaggaacttgacgtgctgcag
agtcaggtggaaacgttgaagcaggagctctcgtcctccaaagacaaaacccaggagctg
aaaaagctggtgtccgagctgcagccatacaaggaacaggctcagtgcctttctgctgag
cttgacacctgcaagcatgatgttgaacaattgtcgaaaaaactggaaaagcagagccta
gatctggaaaaggtgtgtaaggaaagtgaggatgttaaggctgtgagaggaaaactggag
acacagctttcagatttgcagactaagctctctgcccttgaggttactcaccaggagctt
tcactccggaatgaagaactgctaaaaaccagagatgagctctcaaaacgtcaagaagag
ttactcaccaacaacaagcgctcggatgaggaacgggttgtattgaacaaagagttggag
aagctcagagatcttcttcagcaagtgcagactgaaaacaagaacctgacgcgtactaaa
ggtgaaaaaatagcccaaatcgaggagcttcaaaagcaaaatgcagaaaagaacgacttg
ctcctaaagcatcagcaggacattgagcaactacaggctaaaaagaagcaactgcttgag
gattatgaaaaggtctgtaaagagaggagccggcttgaagaggacgccaacgaaagcagg
tcaaagctcacgtgtgagaaggacgatctcattttagagagagatgctgctagaaatgcc
aaaaagtctctcgatgctaagaatgctgaactgcaggaaaaactcaaatccttgaacttg
gaaaaagaagatcttacaatgaagaatacccagctgcaggcactcacagaaacactgaca
aaagagaaggtggagatgtcctctgagatcagtgcctctgtgtgcgataaaaagaacctg
gagacagtgaaggaagagctccagaataagcttgctgttacaaagaaagacctggagact
tctatccgtgaatgtgaagaactgaaggcctcaaaaaggagcctgagccagatgctggag
gagttcaagacaagcagtcaggtgaccgattctgagagagttcaccttctgcaggagaaa
gaaaacctgcttgcgatccaaagaaaagtctgtaacgagaaggaagagctcctcagagag
atggaagaaataaaggaaaagcttcaaacctcaacagaacaacagtttcaggccaatgag
aaattcaaagaagtatcatcgtcctttgagcaagagaggcaagtgtttcgtcttcagaat
tctgaaactgagatgtctctgcatgctattcgaaaggaaaagatgagcctggattcagca
ctagagcagcagaaaatggattatgagcgtttggcaggggagaagggagagctggaggag
aaacaaaccaaggccttatctgagaaaagtcttctttctcttgagcgtgataagctggct
agtgatgttcgtttaactaaggacgagatggacagttactccagatctaatgccgacctc
attcaagagaaatctcatctatcaacattgctagaggaaaacaaacggcaaaaagatgaa
gttgaagcggaggtgacctctttgaaacgagaaaaggctgaactacagaatgaactgcag
aaacaaaactctgatattgaaaatcttgaaaagggcaaacgtgaacttgttcaagaacat
ggtaaattaaaaatggattttgagaagaccaatttagaacttgtgcaacagctggataac
ctgacgaaaaatggtcatcgtctgcagtcgctgcaaactgaagctgacaagaaggtgcag
tctctgcagaaagagaaccaggggctgcttcaggagatccaagagtttaaagctcagact
gaatcgatggcagatgcaaagcagctccttgagacccagctacaagctgaatccggtgaa
cggacgaaagagatgtcccataaggatggtctttccaaacaaatcgatgaactgcagaaa
acattgtccaaagctacacaagaaaataaacagatctcttcaaaccttaagaatgctgat
gagcaaaaccagtcttttattgtggataaggaggctttggaaacacagttgaagcagcga
gagaaagaaaccagtcacttgacggaagataaagagcagttactatctaagcttgaggag
atgggcaaacagatgaccctcttgaccacagagaaagaggaccttctagctgcacagtgt
aaagtagagcaggatgtttcttctctccatgccaacaaagaaaattggctcacagaacga
tcaaggctgctcgaagagttggagaagttgcaggttagccagaaacaattggaggttgac
gtcaaggccctacaaaccgataaagaagttttggataagcagtacaggaatgccgtcgca
gaggtatcagcttctgctgcagtgaaagaagagatttcctccagcgtctcagggttaaca
gcccagaagaattccctgcaggtggagagagatgaagccatccaggaagtcaggcagctc
gagtcccaactaaaaaatgtcatttctaagcagcttgaggctacagaggcctctggcacg
actgctgaggctctcgaacagctggctaaagagaaggccagtttgattcaggagaagaac
gaggccacgtctttgctggtcgagctgcgcagctcccaaaaggagacggacactcagctg
gaaacactgaaaaaggagaattccaagcaccaagaggatctgaaagtttccaaagatcag
cttcacacagaaagtcagaagatcaagagtctgtgcaaggaaatcgaggagcataaagag
gcggtttctgtgaagtcgcagtccctgcagactctgcaggatgaaaacaacaagctgact
caggagctggataacaaacacagagaccagagtgatgtctcgaagctcaaagatgggcag
acaaaactcaaaaagcagttgggacagttgaagcaaagcctgccaattaatgccttcagt
gagagcaccttgaaggagcagttggacaaggagaaggccgccctccaacagtccgtccat
aaaaacagtgccttaatctcagaaaaggaccagcaggtggaaaacctgaggagcgagctg
actgcactgcgcggggaaagtgtctcggctaaggcgctgcagggaactattcaggccttg
gagcgggacaaggccaatctacaggagcgtgttcagagactggagaaggacctggctgca
gggcctgagaacatcaaccactcgtcaggtgatgctgcttcggaccagtcaagggaggat
aaggacactgcagacagtcaggcagcgattgagttcctgaattcagtcatcgtcgacctc
cagaagaagaacaaggaactcaaggacaagctggagaaaatggcagaggctgctctcaat
gggaataatcggagtgagctggataactacgacggcaacggacaggaacccgtgaagaag
aaggtgcccccgaggctgttctgtgacatctgcgactgcttcgacctccacgacaccgag
gactgtcccacgcaaatgcagatgcccgactcgcccccacacaccacctaccacggctgt
aaggaggatcgggcctactgtgacatctgtgaggtctttggccactggaccgaatcctgt
actgacgatcagaccttttaa
DBGET
integrated database retrieval system
