Hippoglossus stenolepis (Pacific halibut): 118114980
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Entry
118114980 CDS
T08308
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118114980 (lrba)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Others
Others
118114980 (lrba)
Endosome - Golgi transport
118114980 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118114980 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
SUKH_6
EIF3I
Motif
Other DBs
NCBI-GeneID:
118114980
NCBI-ProteinID:
XP_035021692
LinkDB
All DBs
Position
2:complement(22043133..22222692)
Genome browser
AA seq
2940 aa
AA seq
DB search
MASEEAAGAAQPGDGKDGRPGAVQLNPAVPIRGIRMKFAVLAGLVEVGEVNNRDIVETVF
NLLVGGQFDLEMNFIIQEPDSILCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTD
VGLIQQVLQRISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGQEGQWPRHAVKL
LSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKD
KPYLYCFRTSKGLGYSAHFVGGCLIVTSLKTKGKGFQHCVKYDFKPQKWYMVTLVYIYNR
WKNSELSCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQL
CLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDNRQPSS
HELDTSVGCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLA
FSRYLSNLQNGILLLKQLCDHILFNPVIWIHAPAKVQLTLYTYLATEFISTVTIYNAIRR
VGTVLQVMHTLKYYYWVVNPQDRSGVIPKGLDGPRPNQKEILSLRAFLLLFVKQLIMKDH
GVKDDELQSILNYLLTMHEDDNIMDVLQLLVALMSEHPGSMIQAFDQRNGIRVVYKLVAS
KSEGIRVQALKVMGYFLKHLPPKRKSEVMLSHGLFSLLTERLMLHCSQFSMTTYNVLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNCPLSPESMEVRRLFLSDMIKLF
NNSRENRRSLLQCSVWQEWMISLCFISPRNNEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKENLSRMFRQYQHQESLGSVRTISGVSQSSENMEGVNGSPAE
ETAPNTVIELRVDELSQKSPESASSSTITSSPQETADERGQASITVSNILARPEEKEQKS
AEGPPRDNSGDGIETDATATPTTAAEEQSEETNKQEAATETSPDEDADHLQTSAGDPSET
LDTKAAEVTRDSATTPASDDAQTPTDGEKCESEHNEGESSNSATEPPVVSEEEEVKADQA
TPQTAACQESSNEDQVDVSSVGDQIQPSDVDDSQEETSYASAAAEEGEALKEEDAHADDE
GNKSDQEGKEVKTEDEREETLKVSEDEKPVESETEGKPNLENPTPPVETPEQNVTEPPKE
KVEDEQSETTTSDQQPSDTTLPPTAQEGAEQSDPASPSQPSETSGGEETASSAPESSSSI
AAAAASSDTQKSTDTVSKTKEIKIARLDVSNVALDTERLELKETSITDTSQGPSTTATAS
AGSSSSQPRESGASAPRSTMFRIPEFRWSHMHQRLLTDLLFSIETEVQMWRSHSTKTILD
FVNSSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATSSSHELENIEPSQGLTLEAS
VTFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGLLRQCLRLVCAMAVRNCLECQQAQV
KQGSEGPVRSATQSSGLGASKSASAQSPVDAVTGGMSPIRDLDRLLQDMDINRLRAVVFR
DIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKKHPQRSQSARSTDSGALSAGLEV
ENGVSLRRYDSGIGDDHTSTAASEADLSSSGMTHGPDAISEALSTLSSEVRPALPSDSKG
KNVKDILRSLVSTPSEDIMVDPSLLPPAFLGSMSDLTRNSLQIHSFDRSVVVAPKKAGMA
PSPGTATPVPAATAASVSAGTPIDRVAVVSAGDASESISADSAASGGQVPASASLPSVPP
LSPVTQNTAPNMSISERLENALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLM
CMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFI
LSRQRAEDIHKHAEFESNCAQYAAEKRDEEKMCDHLIRAAKYRDHVTATQLIQKIVNILT
DKHGAWGNSSNSRPREFWRLDYWEDDLRRRRRFIRNPFGSNHSEATLKAAAEHVADISAP
EEDILKGKQSIRSHALGNQNLESETSLDGDDDTLSSLDEKDLENLAGPVNLSTGVQLVAP
AAVVKGTLSITASEVYFEVEEDEPSFKAIDPKILAYTEGLHGKWLFTEIRAVFSRRYLLQ
NTALEIFMANRTAVMLNFPDAATVKKVVHSLPRVGVGTNFGLPQTRRISLATPKQLFKAS
NMTQRWQRREISNFEYLIFLNTISGRTFNDLNQYPVFPWVITNYDSAELDLTLPSNFRDL
SKPIGALNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSSFTMMWLLRMEPFTTFFLNFQ
GGKFDHADRTFSSVARAWRNCQRDTSDVKELIPEFYYLPEMFVNSNRYNLGVMEEGSVVS
DVELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEATRALNVFYYLTY
EGAVNLNSFNDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVYLLLQTPLMFTEQM
QQDVIMVLKFPSNSPVTHVAANTQPGLTSPAIITVTANRLFAVNKWHGLAGHQSATVQDQ
QYQLPVEIDPLIVSNVGSHRRQISDLLDQSIQISSQCFIITADNRFILLCGFWDKSFRVY
STDSGKLTQIVFGHRDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGESLG
TEFTTPRAILTGHDCEVTCASVCAELGVVISGCKEGPCLIHSMNGDLLRTLEVPERCMRP
RLIQSSTEGHCMIYYDKGQFCLFSVNGKLLGHMEVEDSIKAMLLSRDGQYLLTGGDGGIV
SVWQVHNLKQLFAYPGCDAGIRSMAISHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8823 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggaggcggcgggcgctgctcagccgggggatggaaaggacgggagaccg
ggcgccgtgcagctcaaccccgcggtgcccatccgggggatcaggatgaaattcgccgtg
ctggccggcctggtggaagttggggaagttaacaaccgagacatcgtggagaccgtgttc
aacctgctggtcggcggccagtttgacctggagatgaacttcatcatccaggagccggac
agcatcctgtgcatggtggagctgctggataagtgtgagcccacctgtcaggctgaggtc
tggagcatcttcactgccatcctcaagaagagcgtccgcaacttgcaggcgtgcaccgat
gtggggctcatccagcaggtgctccagcgtatatccaccacagacagcatgatcgcagac
ctcctcgtggacatgttgggcgtcctcgccagctacagcatcacggtgaaagagctgaag
cttttcttcagcaagctgcaggggcaggaaggccagtggcctcgtcacgcagtgaagctt
ctgtcagtgctgaagtacatggctcacagaaacggtcccgactccttcttcagctttcca
ggaaagaatgcagctgccatagctctgcctcccatcgcaaaatggccgtaccagaatggg
ttcacattccacacgtggctccgcatggatcctctcaacaacatcaacgtagacaaagac
aagccttacctctactgtttccgcaccagtaaaggactgggttactctgcgcactttgtg
ggcggctgtttgatagtgacctcattaaaaaccaaggggaaaggattccagcactgtgta
aaatacgacttcaaaccacagaagtggtacatggtgactcttgtttacatctacaaccgc
tggaaaaacagtgaactcagctgctacgtgaacggagaactggcttcctttggagacatc
gcctggttcgtcaacaccagtgacacatttgacaagtgtttcctgggatcgtcggagacg
gcagatgccaaccgtgtgttctgtggacagatgggggcagtttacctgtttggagaggct
ctcagtgctgctcagatcctggccatttatcagctggggcccggctaccagggcacattc
aaatacaaggccgagagcgacctgctgtttgcggagcatcataagaccttactgtacgac
ggcaagctgtcctctagtattgccttcacgtacaaccctcgcgccacagatgctcagctc
tgcctcgagtcctcccccaaggacaatgcctccattttcgtccattcaccccacgcactc
atgctgcaggacgtgaaggctgtggtgactcactcagtccagagtggcatccactcaatc
ggaggcgtgcaggtcctcttccctctgtttgcacagctggataatcgccagccctccagc
catgagctggacacctctgtcggctgcactttgctgtcctttgtgatggagctcttgaag
aactcggtggctatgcaagagcaggtcctggcctgcaaaggcttcctcgtgattggctac
actttggagaagtcctccaaggtgcatgtgacgcggcccgtcctggacatcgtgctggcc
ttttccagataccttagcaacttgcagaacggcatcttgctgctgaagcagctgtgtgac
cacattctgttcaaccctgtcatctggatccatgcccctgccaaggtgcaactgaccctc
tacacttacctggcgacggagttcatcagcacagtgaccatctacaacgccattcgcagg
gtgggcacggtgctgcaggtcatgcatacactgaaatactactactgggtcgtcaaccca
caggaccgcagcggggtcatccccaaaggcctcgatggtccgaggccaaaccagaaggag
atcctgtctttgcgagctttcttgttgttgtttgtcaaacagctcataatgaaggatcat
ggagtcaaagacgacgagctgcagagtatcctcaactacctccttaccatgcatgaggat
gataatatcatggatgtgctgcagttgttggtggctctgatgtctgaacatccagggtcc
atgatccaggccttcgaccagcgcaatgggattcgtgtggtttacaagcttgtggcctca
aaaagtgaaggaattcgggtgcaggcactcaaagtgatgggctactttctgaagcacttg
ccaccaaagaggaaatctgaggtcatgctgagtcacggcctcttctctctgctcactgaa
cggctgatgctgcactgcagccagttcagcatgacgacctacaacgttctcttcgagatc
ctcacagagcagatctgcactcaagtgatccataaacagcatccggaccccgactccact
gtgaagattctcaacccacagattctaaaggtaatagctgctctactgaagaactgtcct
ctgtctcctgagagcatggaggtgcgccggctcttcctgtcagacatgatcaaactgttc
aataacagccgagagaaccgcaggagcctgctgcagtgctcggtgtggcaggagtggatg
atctccctgtgcttcatcagcccgcgaaacaacgaggagcagaaaataacagagatggtg
tacgccatcttccgcatcctgctttaccacgccatcaaatatgagtggggtggctggcgc
gtctgggtggacaccctgtccatcacccactccaaggtgacctttgaacagcacaaggag
aatttgtcccgcatgttccgtcagtaccagcatcaggagtctcttggctcagtccgcacc
atctccggtgtcagccaaagctccgagaacatggaaggcgttaacgggtcacccgcagag
gagacggcccccaacaccgtcattgagctcagagtggacgagctgtcccagaagtcccct
gaatcagcatccagttccaccatcacctccagcccacaggagaccgctgatgaaaggggg
caagcatccatcacggtgtcaaacatcctggcgaggcctgaggaaaaggagcagaagtcg
gctgaggggcctccaagagacaactcgggtgatggaatagagaccgacgctaccgcaaca
ccaacaacggctgcagaggaacagagcgaagagaccaataagcaggaagcagcgactgag
acttcccctgacgaggacgcggatcatctacaaacatccgcaggtgacccgtctgaaacg
ctggacacaaaagcagcggaagtgaccagagactctgctacaactcctgcgagtgatgat
gcacaaacaccaacagatggcgaaaaatgcgagagcgaacacaacgaaggagaatcgtca
aactctgcgacggaaccaccagtggtttcagaagaagaagaagttaaggccgaccaagcc
acccctcagactgcagcctgtcaggagagcagcaatgaggaccaggtcgatgtttcatct
gttggcgaccagatccaacccagcgatgttgacgatagccaagaggagacttcttatgct
tctgctgctgcagaggaaggggaagcattgaaggaggaagatgcacatgcggatgatgaa
gggaataaaagtgaccaggaaggaaaggaggtaaaaacggaagacgagagagaagagacg
ctgaaggttagtgaagacgaaaaacctgtagagagcgaaactgaagggaaacctaatttg
gagaatccgactcctccggtggaaacacccgaacaaaatgtgacagaaccacccaaagaa
aaggttgaagatgaacagtctgaaaccacaacttcagaccagcagccctcagacaccaca
ctgccccctacagctcaggagggtgcagaacagtcagaccccgcctcacctagccagcct
tcggagaccagcggtggagaggaaaccgcgtccagcgccccagagagcagcagcagcatc
gccgccgccgccgccagctctgacacccagaagagcacagacaccgtcagcaagaccaaa
gagataaaaatcgcccgactggacgtgtccaatgtggccttagacaccgagagacttgaa
ctgaaggagacctccataacagatacaagccaaggcccgtcgaccacagcaacggcatca
gcaggaagttcttcaagtcagccgagagagagcggcgcctcggccccgcgctccaccatg
ttccgcatcccagagttccgatggtcccacatgcaccaacgcctcctcaccgacctgctg
ttctccattgagacggaggtccagatgtggaggagtcactccacaaagacgattctggac
ttcgtgaacagcagtgagaacgtggtgtttgtccacaacagcatacacctcatctcccag
gtggtggacaacctcatcatggcgtgcggaggcattttgcctctgctctctgctgccacc
tcctcctctcatgagctggagaacattgaaccgtctcaaggcctgacgctggaggcctcc
gtcaccttcctgcagcgcctcatcaacctcgtggacgtgctcatcttcgccagctccctc
aacttcacagagatagaagcagagaaaaacatgtcgtccggaggcctccttcgacagtgc
cttcgcctcgtgtgtgcaatggcagtgagaaactgtctggagtgtcagcaagcccaagtc
aaacaaggctccgaaggcccagtccgcagcgccacgcagagctctgggctcggagcgtcc
aagtctgcatctgcccagagtcctgttgatgcagtgacaggtggaatgtctccaatcaga
gatctggaccggctgcttcaggacatggacatcaaccgcctccgggccgtcgtcttcaga
gatattgaggacagtaagcaggctcagtttctggctctcgccgtggtgtacttcatctcg
gtcctcatggtgtccaagtaccgggacatcctggagccgcacaatgataagaaacatccc
cagcgatcccagtctgccaggagcacagacagcggtgccctctctgctggactggaagta
gagaatggcgtttctctccggcggtacgactctggcatcggcgatgaccacacctcgacc
gctgcgagcgaggccgacctgtcatcctccggcatgactcacggccccgacgccatctcg
gaggccttgtccacgctgtcgtccgaggtcagacccgctctgccctctgattcaaagggc
aagaatgtgaaagacatcctgcgcagcctcgtgagcactccatccgaggatatcatggtg
gacccgagtctgctgccaccggcgtttctagggagtatgagcgatttgaccagaaactca
ctgcagatccactcctttgatagaagtgtcgtcgttgcacccaagaaagccggcatggcg
ccatctccaggcaccgccacgcccgtcccagcagccaccgctgcctctgtgtccgctggg
acacctattgaccgtgtcgctgtggtatctgcaggcgacgcctctgagagcatctctgca
gactctgcagcttcaggcggccaggttccagccagcgctagcctgccatctgtcccccca
ctctcccctgtgacccagaacacagcccccaatatgagtatctcggagcgtctggagaac
gctctggagaaggcggctcctctgctgagagagatctttgtggactttgccccctttctc
tctcggaccctgctgggcagccacggacaggagctcctgattgagggcacaagtctgatg
tgtatgaagtccagcagctcagtagtggagctcgtcatgcttctgtgttcacaggaatgg
cagaactccatccagaagaacgcaggtctcgccttcatcgagttggtcaacgaaggcaga
ctgctgagtcacaccatgaaggaccacctggtgcgtgtggctaatgaagctgaattcatc
ctcagccgacagagagcggaagacatccacaaacatgcagagtttgagtccaactgtgct
cagtacgcagccgagaagcgcgatgaggagaaaatgtgtgaccacctgatccgggcggcc
aagtaccgtgaccacgtgacggccacgcagctcatccagaagatcgtcaacatcctgacc
gacaaacacggagcctggggaaactcttccaacagccggccgagggagttctggcgcctg
gactactgggaggacgatttaaggcggcggcgtcgcttcatcaggaacccctttggatcc
aaccactcggaggcgacgctcaaagccgccgccgaacatgtggctgatatcagtgcgccc
gaggaggatattctcaaaggcaagcagtccatcaggagtcacgctctgggaaatcaaaac
ttggagagtgagacgtcgctcgacggagacgatgacactctgtccagcttggacgagaag
gacctggagaatttagcaggcccagtaaacttgagcaccggcgttcagctggtggctccg
gccgcggtggtgaaaggcaccctgtccatcaccgcctccgaggtctacttcgaggtggag
gaggacgagccgagcttcaaggccatcgatcctaagattctagcctacacagaaggcctt
catggaaaatggctgttcacagagatccgtgctgtcttttccagacgctacctacttcaa
aatactgctctggaaatcttcatggccaacagaactgcagtcatgctcaacttcccggat
gctgccaccgtgaagaaggtggtccacagtcttcctcgtgttggggtgggcacgaacttc
ggccttccccagaccaggcgaatctccctggctacaccaaagcagcttttcaaagcgtcc
aacatgacccagcgctggcaacgtcgggagatctccaactttgagtacctcatctttctc
aacaccatctccggtcgcacctttaatgacttaaaccagtacccggtcttcccgtgggtt
atcaccaactatgactcagcagaacttgacctcactctgcccagcaacttcagagatctg
tctaagcccatcggtgcactgaatcccaaacgggcggcattcttctcagacagatacgaa
tcctgggaggatgatcaggtgccaaagttccactacggcacccactactccacctccagc
ttcaccatgatgtggctgctacgtatggaacccttcaccacgttcttcctcaacttccaa
ggaggaaagttcgaccacgccgatcgcaccttctcatctgtggcgcgggcctggaggaac
tgccagagggacacatctgacgttaaggagctgatcccagagttctactacctccccgag
atgtttgtcaactccaacagatacaacctgggagtgatggaagaaggcagcgtggtgtct
gacgtggagctgccgccctgggccaagagtccagaggagtttgtccgaatcaatcggctg
gctctggagagcgagtttgtgtcctgccagctccaccagtggatcgatctgatcttcggc
tacaagcagcagggccccgaagccacaagagccctgaatgttttctactatctgacctat
gagggcgcagtcaacctcaactccttcaacgaccccatgctcagagaggctgtggagtct
caaattaggagttttggacagaccccctgccagttgctcatcgaaccacacccacccaga
agctcagccatgcaagtgtatcttctcctgcagacgccgctgatgttcacggagcagatg
cagcaggacgttatcatggtgttgaagttcccgtcaaactcgcccgtgacccacgtggca
gccaacacgcagccgggtctgacgtcgcctgccatcatcactgtcaccgccaaccgcctc
tttgcagtcaacaaatggcacggcttggcaggtcatcagagcgcgacggtgcaggaccag
cagtaccaacttcctgtggaaattgacccgctcatagtcagtaacgtgggcagtcaccgc
cgtcagatctcagacctgctggaccagagcatccagatcagctcgcagtgtttcatcatc
acggccgacaaccgcttcatcctcctgtgtggcttctgggacaagagcttcagggtctac
tccaccgactcaggcaaactgactcagatagtgttcgggcaccgcgatgtggtgacgtgt
ctggctcgctccgagtcgtatatcggaggagactgctacgtcctgtcgggctccagagat
gccaccctgctgctgtggtactggaacggaaagcacagcagcattggagagagcctcggc
acagagttcaccacaccccgggccatcctgacgggccacgactgtgaggtgacgtgtgca
agcgtgtgtgcggagctgggcgtcgtcatcagcggctgcaaagagggtccttgtctgatc
cattccatgaatggggacctgctgaggaccctggaggtcccggagcggtgcatgcggccc
cgcctcatccagtcctccactgagggacactgcatgatctattatgacaagggacagttt
tgtctcttcagtgtcaacggcaaactgctgggacacatggaggtagaggacagcatcaag
gccatgctcctcagtcgtgacggccagtatctgctgacaggcggagacgggggtatagtt
tctgtctggcaggttcacaacctcaagcagctgttcgcgtaccccggctgtgacgcagga
atccgctccatggccatttcacacgaccaaaggtgcatcatcactgggatggcgtcggga
agcatcgtgctcttctacaacgacttcaacaggtggcaccacgagtaccagacccggtac
tga
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integrated database retrieval system
