Hippoglossus stenolepis (Pacific halibut): 118114984
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Entry
118114984 CDS
T08308
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X2
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118114984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118114984
Transporters [BR:
hsp02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
118114984
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
DUF913
Motif
Other DBs
NCBI-GeneID:
118114984
NCBI-ProteinID:
XP_035021738
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Position
1:complement(3183423..3194276)
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AA seq
744 aa
AA seq
DB search
MDPSRIISNASDVASCLESRPRGAMNVRSPPRRRLRLGRVLFFVSGVLLCFVYTLTLKAR
LSELRGSSQTPGALGAEGGDGDVVEVHVREVTASNETQEEVVSPEGSQPPPVMIVNRTDI
EQCIYVEPQPPKPSPPTPPPSNTTAPPPQAPRRKGGYPEDIFSVEQRRQGWVVLHIMGMI
YMFVALAIVCDEFFVPALEVITVQMQISDDVAGATFMAAGGSAPELFTSLIGVFISHSNV
GIGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLFRDVTFYILDLIMLIVFFLDSMIMW
WESLLLVLGYVSYVSFMKVNSQVEQAVKTQLNKHMSIVKVWTAEGSEKESDATQPPPPAP
APAPPAAPPPAAPPAEEKSKPAPEPPPSGPQLHKQPSEPHDDRARLRLRPVLQRGGSSAS
LHNTSLRSTIFQLMIHTLDPLGEDDDHKPKSEQATAAADPPGGAAAEPSTSQPPKAEEKP
SDQPDESKAAAASAGGSDGSDGSAGDDSGDEDSGDSAESEDEGGRKEEEEEEEEEEEENE
PLSLAWPETRGKQATYLFLLPIVFPLWLTLPDVRNLASRRYFVITFIGCILWIGVFSYLM
VWWAHQVGETVGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDIT
VGLPVPWLMFTLFHDGQPIAVSSNGLFCAIVLLFLMLLFVIISIAACRWKMSRTLGLTMF
ALYFVFLVLSVLLEDRVLVCPVSI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggatccatcgaggatcatcagcaatgcatctgacgtagcttcctgtctggagtcgaga
ccacgaggggcaatgaacgtgcgctcgcctccgaggaggagactcaggctcggccgcgtc
ctcttcttcgtctcgggcgtgctgctgtgtttcgtctacactctgactctgaaggccagg
ctgtcggagctgagaggctcctcgcagacgcccggcgctctgggagcagagggaggcgat
ggggatgtggtggaggtccacgttcgggaggtgacggcttccaacgagacgcaggaggag
gtggtctcacccgagggcagccaacctcctccggtgatgatcgtcaacaggacagacatc
gaacagtgtatctacgtagaacctcaaccccccaaaccttctcctccaactccaccgcca
tccaacaccacagctcctccgccccaggcccctcgcaggaagggcggttaccccgaggac
atcttctcagtggagcagcgacgacaaggctgggtggtcctgcacattatgggcatgatc
tacatgtttgtcgccctggccatcgtctgcgatgagttcttcgtccctgcgctggaggtc
atcaccgtccagatgcagatttctgacgacgtagccggggccaccttcatggcggctgga
ggctctgcccccgagctcttcacctccctgatcggcgtcttcatctcccacagcaacgtg
ggcatcggcaccatcgtgggctcggccgtcttcaacatcctcttcgtgatcggcatgtgt
gccatcttctcccgggagatgctgcacctgacctggtggcccctgttccgagacgtgacc
ttctacatcctggacctcatcatgctcatcgtcttcttcctggacagcatgatcatgtgg
tgggagagcctcctgctggtgctcggctacgtcagctacgtcagcttcatgaaggtcaac
agtcaggtcgagcaggcggtcaagacccagctcaacaagcacatgagcatcgtgaaggtg
tggacggccgagggatcggagaaggagagtgatgctacacaacctcctccacctgctcct
gctcctgctcctcctgctgctcctcctcctgctgcaccaccggcggaagaaaaatccaaa
ccagcgcccgagcctcctccgagcggccctcaactccacaagcagccgtcagagccgcac
gacgacagagcgagactcaggcttcgtcccgtcctgcagcgaggcggcagctcggcctcg
ctccacaacacgtccctgcgcagcaccatcttccagctgatgatccacacgctggaccct
ctgggagaagatgatgatcacaagccaaagtctgaacaggccaccgccgctgctgatcca
ccagggggcgctgcagccgagccgtcgacctcacagcctccaaaggcagaagagaagccg
agcgaccaaccggacgagtccaaggcggcggcagcctcagcggggggctcggacggctcg
gacggcagcgctggggacgacagcggggacgaggacagcggcgactcggctgagagtgaa
gacgagggcggcagaaaggaggaggaggaggaggaggaagaggaggaggaggagaacgag
cctctgtctttagcgtggcctgaaaccagaggcaaacaggccacctacctgttcctgctg
cccatcgtgttcccgctgtggctcacgctgcccgacgtccgcaacctggcgtccaggaga
tatttcgtcataacgttcatcggctgtatcctgtggatcggcgtcttctcctatctgatg
gtgtggtgggctcatcaggtgggcgagaccgtgggcatctcggaggagataatgggcctg
accatcctggcagccgggacgtccatccccgacctgatcaccagcgtcatcgtggcccgt
aaaggtctgggggacatggccgtgtccagctccgtgggcagcaacatcttcgacatcacc
gtcggtctgcccgtcccgtggctcatgttcacgctgttccacgacggccagcccatagcc
gtgagctccaacggcttgttctgcgccatcgtgctgctcttcctcatgctcctcttcgtc
atcatctccatcgccgcctgtcgctggaagatgagccgcacgctgggcctcaccatgttc
gcgctgtacttcgtgttcctggtcctcagcgtcctgctggaggaccgggtcctcgtctgc
ccggtttcaatctga
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