Hippoglossus stenolepis (Pacific halibut): 118115001
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Entry
118115001 CDS
T08308
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118115001 (fem1c)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
118115001 (fem1c)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
118115001
NCBI-ProteinID:
XP_035021736
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Position
9:18142216..18150182
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AA seq
618 aa
AA seq
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MDLKTAVFNAARDGKLRLLQKLLENKDGHEVTKLMGEKTNGATPLLMASRYGHLDLVEYL
LECCCAPVEAGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVKYLVEHKADLEVANRHGHTCLMISCYKGHWEIAQYLLEKGADVNRKSV
KGNTALHDCAESGSLEIMQMLLQFGASMEQDGYGMTPLLSASVTGHTNIVDYLTTHQQTR
HTERVDALELLGATFVDKKRDLLGALKYWKRAMDLRYMDSNNIVHKPEPKQLIMAYDYAR
EVTNGEELDGLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFEDLMGILSKSVL
EIERAVRQTGPMPPDPAQLSKALSIILHLICLLEKVPCSAEQDHFKKETIYRFLKLQPCG
KNGYSPLHLAVDRNTTCVGRYPVCKFPSLTVASILLECGADVNSRDEDDNSPLHIAASNG
HPDIMNLLISCGTHFDSTNAFQQTACDLLDEKELARNVIQPINHTTLQCLAARAIVKHGL
VYRGNIPEKLEAFVLLHR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagacggcggtgtttaacgcagccagggacggtaagctccggctgctccag
aaactcttggagaacaaagatggacacgaggtgacaaagttgatgggcgagaagacgaac
ggggccacgccgctcctgatggcctcccgctacggccacctggacctggtggagtacctg
ctggagtgctgctgcgctcccgtggaggccggcggctccgtgaactttgacggggagaca
atcgagggggctccgccgctctgggccgcctcggcagccggtcacctgaaggttgtccag
tccctgctgggccacggggcttctgtcaacagcaccaccctgaccaactccacacccctg
agggcagcctgcttcgacggccacctggacattgtgaaatacctggtggagcacaaagcc
gacctggaggtggccaacagacacggccacacgtgtctcatgatctcctgctacaagggc
cactgggagatagcgcagtacctgctggagaaaggcgcagatgtcaacaggaaaagtgta
aaaggcaacacagcccttcatgactgtgcagagtcgggcagtttagagatcatgcagatg
ttgcttcagtttggagcttctatggagcaggatggctacggcatgacaccccttctatct
gccagcgtcacaggccacactaacatcgtagactacctgacaacgcatcagcagacaagg
cacacggaacgcgtcgatgccctggagctcttgggagccacatttgtggacaaaaagaga
gatctgcttggagctttgaaatactggaagagagccatggaccttaggtacatggacagt
aacaacattgtccataaaccagaacccaagcagctgatcatggcgtacgactatgccagg
gaggtcactaatggagaagagctggacgggctgatatctgacccggatgagatgcgaatg
caggctctgctcatccgtgagagaatcctcggcccacaacatccagacacatcctactac
atccgttaccgaggcgctgtctacgctgactctgggaactttgagcgctgcatcaatctg
tggaaatatgcgctggacatgcagcagagcaacctggaccccctcagccctatgacggcc
tccagcctgctctcgttcgctgagctcttctccttcatgctacaggacagggccaagggg
ctgctggggacttcggtgtcattcgaggacttaatggggatcctgtccaagagtgtgttg
gaaattgagcgggcagtgagacaaactggaccgatgcctcctgaccctgcccagctcagc
aaggccctgtcaatcatcctgcacctcatttgtcttttggagaaggtgccttgtagtgcg
gagcaggaccacttcaagaaggaaaccatctatagattcctgaagctccagccgtgcggt
aagaacggctacagtccacttcacctggccgtcgaccgcaacaccacctgcgtgggccgc
taccccgtctgcaagttcccctccctcactgtcgcctccatcctgctcgagtgtggggct
gatgttaacagccgagatgaggatgacaacagccccctccacatagctgcatccaatggt
caccccgacatcatgaacctgctcatttcctgcgggactcacttcgatagcaccaacgcc
ttccaacaaacggcctgtgacctcctggacgagaaggagctggccaggaatgtcatccag
cccataaaccacaccacgctgcagtgcctagccgccagggccattgtcaagcacggcctc
gtctaccggggaaacatccccgagaaactagaggccttcgtcttgctccacagataa
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