Hippoglossus stenolepis (Pacific halibut): 118115009
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Entry
118115009 CDS
T08308
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118115009 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118115009 (msi1b)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118115009 (msi1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118115009
NCBI-ProteinID:
XP_035021756
LinkDB
All DBs
Position
9:7799433..7818879
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AA seq
349 aa
AA seq
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METEGSQSSLSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAAVVRGSNPSRSAGFLSTSSP
GPMADLYGTAGQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagcctgtccaccacggactcccctcacgacccctgt
aaaatgttcataggtggactgagctggcaaacaacacaagagggtctgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccggttaccaagcgctcg
agagggttcggattcgtcacctttgttgaccaggccggcgtggataaagttttggcccag
accaggcacgagttggactccaaaacaatcgatccgaaggttgcgttccctcgcagagcc
cagcccaagctggtgactcgaaccaagaagatctttgtgggaggcctgtcagtgaacacg
actatcgaggacgtcaagcagtacttcgaccagttcgggaaggtcgacgatgctatgctc
atgttcgacaagaccaccaacagacacagaggattcggcttcgtgacgtttgagaacgag
gatgtggttgagaaagtctgcgagatccacttccacgagatcaacaacaaaatggtggag
tgtaagaaagctcagcccaaggaggtgatgtcccccacgggctctgccagggggcgctct
cgggtgatgccctatgggatggacgccttcatgctgggcattggtatgctgggttatcct
ggcttccagacagccacctacaccagccggagctacgctggcatcactcctggatacacc
taccagttccctgagttccacttagagaggactccccttctgacttcaccccacccccct
gagctcacagccattcctctcacagcgtatggaccaatggcagcagcagcggcggcagca
gcagtcgtcagaggctctaacccgtctcgctcagctggatttttaagtacgagcagccct
gggccgatggcagacctgtacgggaccgccggtcaggagtcggcagtcagcagttacctc
agcgctgccagccccgccccgagcactggattcagccacagtttggggggccctttgatc
gccacagccttcactaacggatatcactga
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