Hippoglossus stenolepis (Pacific halibut): 118115014
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Entry
118115014 CDS
T08308
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118115014 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118115014 (ufd1l)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118115014 (ufd1l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
118115014
NCBI-ProteinID:
XP_035021767
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All DBs
Position
9:21947921..21951719
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AA seq
310 aa
AA seq
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MFSFQVFDHPMSRGFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERRPQHQEEPTEEEPDPSSYADMDMGFRAFTGSGNRLDGK
LKGIEPSPVPLAPSDIKRGIPNYEFKVGKITFIRNSRPQPRRFIDDDDALNRFIAFSGEG
QSLRKKGRKP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttccaggtcttcgaccacccgatgtcccggggcttccagaaccgcttctcc
actcagtaccgctgctactcggtgtccatgctggcgggacccaacgaccgctccgacgtg
gagaaaggaggcaaaattataatgccaccgtcagctcttgaccagctcagccggcttaac
atcacgtatccaatgttgttcaagctgaccaacaagaactcggacagaatgacacactgt
ggtgttctggagtttgtggcagacgagggaatctgttatctgccacactggatgatgcag
aatctcctgctggaggaaggaggattggtgcaagtggaaagcgtgaacctcatggtggcc
acctactcaaagttccagccacagagtcccgacttccttgatattacgaacccaaaggca
gtactggagaatgctttgagaaactttgcctgcttgacaactggtgacgtcatagctatc
aactacaatgaaaagatatatgagctgcgagtaatggagaccaagccagataaagcagtt
tccatcattgagtgcgatatgaacgtggatttcgatgctccattgggttacaaagagcct
gaacgacgacctcagcaccaggaggaaccaacagaggaggaaccagatcccagcagttat
gcagacatggacatgggattcagagctttcacgggttctggtaatcgtttggatggtaaa
ttaaagggaatcgagcccagtcccgttcctctcgctccaagtgacattaaaagagggatt
cccaactacgaattcaaagtcggcaaaatcaccttcatcagaaactcaaggcctcagccc
aggagatttatagatgatgatgatgcattgaacagattcatcgccttctcgggcgaagga
cagtcactacgcaagaagggcagaaagccttaa
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