Hippoglossus stenolepis (Pacific halibut): 118115035
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Entry
118115035 CDS
T08308
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp02010
ABC transporters
hsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118115035 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118115035 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118115035 (abca2)
Transporters [BR:
hsp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118115035 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
118115035
NCBI-ProteinID:
XP_047197231
LinkDB
All DBs
Position
9:complement(2646964..2719014)
Genome browser
AA seq
2525 aa
AA seq
DB search
MGFLHQLHLLLWKNISLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEVSFYSAA
PLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERIREVVEQNRLFTSDRPGLGQE
LETLQRHLESLSSTPLPPDYNFNKSQGFTLASVLKNQSAFHQFLVKNLSLSNSTSSLLLN
IPVSVKEVHSLIFGTSLRAGGLTQSWIQGAKDSIKKPGDRVLNLEESLLGDVQGADGGLI
YKALRDPTKAAHREALLTLMSQALGLTGVTGNQGNDQQALKEVEGILLTGAILETLTCGE
GGASELGNILLVPEKQQPALQAYRSALCSGGEGQRSERFRQMSLELREQINTQSVTEKLH
LDQPNSWAPLSQSQLGSLLKDLVNVERLLKDVDMLSGLARLLPKGACAGRSPTSPPNMTW
PLNSTTWGPNATDIPREEGEKGSEGGGRAREGKEEAENPHSQFSAFVQLWAGLQPILCGN
NRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVDKVIQKANETF
AFVGNVTHYTRVWLNISAQLRTFLEEGRLHSHLVWLHQLSSELQLHPELLNGTDSELMQS
LIEGNYSLPNTSTLLEQLDTIDNAACGWTNFMSKVSVDVFKGFPDEDSIVNYTLNQAYQD
NVSVFASVIFQTNKDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYGF
VWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSV
AMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLLH
SNPFIIWLFLTIYAVATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVAH
DKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTISQSPVEGDDFNLGLSMMML
IIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQRSYWSGSGRVETWDWPWCGGGAARLSV
MEEDQACAMDQRRTEEMRGIEEEPSHLPLVVCIDKLTKVYKTGNKLALNKLSLNLHENQV
VSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMERIRQNLGMCPQHNVLFDKL
SVEEHLWFYSRLKGMAEEDIRKEMDKMIVDLELSNKRHSLVQTLSGGMKRKLSVAIAFVG
GSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKL
KCCGSPLFLKSTYGDGYKLTLVKKQSEGPGQGSQQLPPSSLSPSSSLSPCSEARVTQFIR
QFVASCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDSLALTSLGVMDTTLEEVF
LKVSEEDQSLENSDADMKGSPGGSSVGKSSVGSGGLGGTQGEIGPSVESVKPEVELSNLV
MCSKLTQSQSSLKSSSSIGSVRGDEGGLYADFYGDYCPLFENSQEPDSASLRGDAENRSS
PEPEVQEGQGSFKLEGWWLKLSQFHGLIVKRYHCAKRNTKGLFSQIMLPAFFVCVAMTVA
LSVPEIGDLPPLILSPSQYHNYTQPRGNFIPHANEDRPQYRSKLFPDASPQKIINTLHLP
SGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPP
PSPAPSDDPDPRFEDGLWNFTVAPPTTVHEPVTSPPTLPLSIHEPVRCTCSMQGTGFSCP
SGVGGRPPLMKVVTGDILVDITGRNVSEYLLFTSDRLRLHRYGGLTVGNIQKSIPASFGV
KIPPMVRKIAVRRSAQVLYNNKGYHSMPTYLNVLNNAILRANLPASKGNPSAYGITLTNH
PMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDP
VIYWLANYIWDMLNYLVPATCCVIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYP
ASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLKKVNSYLKTCFLIFPNYN
LGHGLMEMAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFLITILCQYN
FLRKPPRVPVSCQPIDDDDVDVACERRRVLRGDADNDMLKIENLTKVYKSRKMGRILAVD
RLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDECTTGGEAFINGNSILRDLLHVQQSVGY
CPQFDALFDDLTAREHLELYTRLRGIPWKDQDRVVQWALEKLELSKYADKPACTYSGGNK
RKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKSGRSVVLTSHSMEECEAL
CTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKSSSSVKEVVRFFNRNFPEAVLKER
HHTKVQYQLKSEWISLAQVFSKMEQVVEVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQ
EVLPPGGAQSPLQHILNLLKSRPANTELNALISEAPEELESDDDEGLISFEEERVQLSFN
TDTLC
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctgcaccagctccatctcctgctgtggaagaacatctccctgaagaggagg
gggccgtgggtcctggcctttgagatcttcatcccgctggtcctcttcttcatcctcctg
ggcctgaggcagaagaagccagcgattcctgtcaaggaagtgtccttttacagcgcagcc
ccgctcacgtcggctggcatcattcccatcatgcagtctctgtgcccagatgggcaaagg
gatgaatttggtttcctgcagtacaagaactccactgttacccagctgctggagcggatc
cgtgaagtggttgaacagaatcgactcttcacgtctgaccggcctggtttgggtcaggag
ctggagaccctgcagcggcatctggagagtctcagctccacccccttaccaccggactac
aacttcaacaagagccaaggcttcacactggccagcgtgctgaagaatcagtcggctttc
catcagttcctggtgaagaacctctccctgtccaactccaccagcagcctgctgctcaac
attccagtcagcgtcaaagaggtgcacagtcttatctttggtacatctcttagagctggt
ggactgacccaaagttggattcagggggcaaaagacagtattaaaaaacctggagataga
gttcttaatctggaggagagtctgctgggagatgtccagggtgcggatggaggactgata
tacaaagccttacgggacccgacaaaggccgcccacagagaggctctgctcacactgatg
tctcaagccttaggcctcactggggtcacaggaaaccaaggaaatgaccagcaggccctg
aaggaggtggaggggatcctcctgactggagccatcctggagaccctcacctgtggggag
ggcggagccagtgagctcggtaacatccttttggtgcctgagaagcagcagccggcgctg
caggcctatcgcagtgcattgtgcagcggaggggagggtcaaaggtcagagcgcttcagg
cagatgagcctggagctgagagaacagatcaacacacagagtgtcactgagaagcttcac
ctggatcaacccaactcctgggctccactgtctcagtcccagctgggatcattgttgaag
gacctggtcaatgtagagaggcttctcaaggacgtggacatgctctctggcctggctcgc
ctgctgcccaaaggagcctgtgctggtcgctctccgacctcccccccgaatatgacctgg
ccccttaactccaccacctggggccccaatgccactgacatccccagagaggagggggag
aaaggatccgagggagggggaagagccagagaagggaaagaggaggcagagaatcctcat
tctcagttttcagcatttgtacaactgtgggctggactgcagccaattctgtgtgggaac
aacaggatcattgagccagaggctttgaagcagggcaacatgagttctttgggattcacc
agcaaagaacaaaggaatctgggcttactggttcatttgatgactacaaatcccaagatc
ctctactcccccatcggctctcaggtggataaagtgattcagaaggcaaatgaaacattt
gcatttgttgggaatgtgacacactacacccgggtgtggctgaacatctccgcccagctc
aggacctttctggaggagggtcgtctgcacagtcacctggtgtggctgcatcagctgtcc
tcagagctccagctgcacccggagctgttgaatggcacagacagtgaactgatgcagagt
ctgattgaagggaactacagtcttcctaatacctccaccctgctggagcagctggacacc
atcgacaacgctgcctgtggctggacaaactttatgtctaaggtcagcgtggatgtcttc
aagggctttccagatgaggacagcatcgtcaactacaccctgaaccaggcctaccaggac
aacgtgtctgtgtttgccagtgtgattttccagacaaacaaagatggctcgctgccccct
catgttttgtacaaaatcagacagaactccagctttacagaaaagaccaatgaaatcaga
cgggcctactggcgtcccgggcccaacactggggggaaattctattttctctacggtttt
gtttggatccaagatatgatagagagagccatcatcaacacatttgtgggccatgatgtg
gtggagcctggcaactatgttcagatgttcccctacccatgttacaccagagacgatttt
ctgtttgtgattgagcacatgatgcctctgtgcatggtgatctcctgggtttactcagta
gccatgatgattcagcatattgtggctgagaaggagcaccggctcaaagaggtgatgaag
atgatgggtctgaacaatgcagtccactgggtggcttggttcatcaccggctttgtccag
ctgtccatctctgtcactgctctgacagccatcttgaagtatggccgggtgttgctccac
agtaaccccttcatcatctggctcttcctcactatctacgctgtggccactatcatgttc
tgttttttggtatcagtaatctactctaaggccaagctggcttcagcctgcggaggaatc
atctacttcctcagctatgtgccctacatgtatgtggccattagggaggaggtggcccat
gataagatcactgcctttgagaagtgcatcgcttctctgatgtccaccacagcctttggt
cttggctccaagtattttgcactatatgaggtagcaggtgttggcatccagtggcggacc
attagccagtcaccagtagaaggcgatgactttaacctgggtctgtccatgatgatgctc
atcatcgatgccagtgtgtatggtgttctaacctggtacattgaggctgtgcatccagga
atgtatgggctgccccgcccatggtacttccccctgcagaggtcctattggtcaggcagt
ggccgcgttgagacctgggattggccatggtgtggagggggggctgccaggctcagtgtg
atggaggaggaccaggcttgtgcgatggaccagcggagaactgaggagatgcggggcata
gaggaggagccgagccacctgcccttggtggtgtgcatagacaaactcaccaaggtttac
aagaccggcaacaaactggccctgaacaaactcagcctcaacctccatgaaaaccaggtg
gtctccttcctgggacacaatggtgctggcaagaccacaaccatgtccatccttacaggc
ttgttcccgcccacttctggctctgcaacgatatatggtcatgacatccgcacggagatg
gagcgtattcgccagaacctgggcatgtgtccgcagcacaacgtcttgtttgacaagctg
agcgtggaggagcacctgtggttctactccagactcaaaggcatggctgaagaagacata
cgcaaggagatggacaagatgattgtcgacctggagctatcaaacaagcgccacagcttg
gtgcagactttgtccggtgggatgaagaggaagttgtctgtggccattgccttcgttggc
ggctccagggccgtcatcctggacgaacccacagcgggggtggacccttatgcccgcagg
gccatctgggacctcatcctcaagtacaaacagggtcgcacaattctgctgtccacccac
cacatggacgaggcagaccttctgggagaccgcattgccatcatctcacatgggaagctc
aagtgctgcggctcaccgctcttcctgaagagcacctacggagacggatacaaactgacg
ctggtcaaaaagcagagcgaaggcccaggccagggcagccagcagctgcctccttcgtct
ctgtctccgtcctcctctctgtcaccttgctcagaggcccgggtcacccagtttattcgg
cagtttgttgcttcctgcctgctggtgtctgattccaacactgagctgtcctatgtactg
ccctccgaggctgtgaagaagggctgtttcgagaggctgttccaggctttggagcagagt
ttggacagcctggccctgaccagtttgggggtgatggacaccaccctggaggaggtcttc
ctcaaagtgtctgaggaggaccagtctctggaaaacagtgacgctgacatgaagggttcc
ccagggggcagctcagtggggaaatcctcagtgggctcaggaggcctgggggggacacag
ggtgagattggaccctcagtggagagtgtgaagccggaggtggagctgagtaacctggtg
atgtgttccaagctgacccagagccagtcatctctgaaatcctcctcgtccatcggctca
gtgaggggggatgaaggaggactctacgcagacttctatggagactactgtccgctcttt
gagaacagccaagagcccgactctgccagtctcaggggagatgcagagaaccgttcgtcc
ccagagccagaagtccaggaggggcagggcagcttcaagttggagggttggtggttaaag
ctgagtcagtttcatggcctgattgtcaagaggtaccactgtgccaagaggaataccaag
ggcctcttctctcagatcatgctgcctgctttcttcgtctgtgtggccatgactgtggcc
ttatctgtgcctgagattggagatctgcctccactgatcttgtccccatctcagtatcat
aactatacccaaccaagaggcaactttattccccatgccaatgaagacagaccccagtac
aggagtaagctgtttccagacgccagtccacagaagatcatcaacaccctccatctgccc
tcgggcgtgggagctacctgcgtcctcaaaaccccctttaacagcaccctggaccaactg
gcccagaccctcaaccccagcgccaacaactccaagaccctggccgcccgctactttgac
tccatgtgtctggactccttcacgcagggggtcccgctctccaactttgtaccccctcct
ccttccccggcaccttcagatgacccagaccctcgcttcgaggacggactgtggaacttc
accgttgcccctccaaccacggtccatgagcctgtgacatcccctcccaccctcccatta
tccatccatgaaccagtgcgttgcacctgctccatgcagggcacaggcttctcttgcccc
agtggggtgggaggacggccccccctcatgaaggtggtgacaggggacatcctggtggac
atcacaggccgcaacgtctctgagtatctgctcttcacgtcggacagactgcgcctgcac
agatatggtggtttaacagtggggaacatccagaaatcaatcccagcatcctttggggtg
aagatacctccaatggttcgcaagatagcagtccgcagatcagctcaggttctttacaac
aacaaaggttaccacagcatgcccacgtatctgaacgtcctcaacaacgccatcctacgc
gccaacctaccggcatccaagggcaacccatctgcctatggtatcaccctgacaaaccac
ccaatgaatcgaaccagtgccagcctgtctttggactacttgctgcaggggactgatgtg
gtgatcgctatcttcatcattgtggccatgtcttttgtgccagccagctttgtggttttc
ctggtcgcagagaaatccacaaaggccaaacacctgcagtttgtcagtggctgtgaccct
gtcatctactggctggctaactacatatgggacatgctgaattacctggtacctgccaca
tgctgcgttatcattctgtttgtgttcgacctgccagcctacacctcgccgactaacttc
cctgcagtcctctccctctttctactctatgggtggtccatcactcccatcatgtaccca
gcatccttctggttcgaggttcccagcacagcctatgtgttcctcatagtcatcaatctc
ttcataggcatcactgcaactgttgccaccttcctcctccagctctttgagcatgacaag
gatctgaaaaaagttaacagttacctgaagacctgttttctcatcttccccaactacaac
cttggccatggcctgatggagatggcttacaacgagtacatcaacgaatactacgctaaa
ataggccagtttgacaagatgaagtcaccgttcgagtgggacattgtgactcgaggtctc
gttgccatgacgattgaaggctttgttggcttccttatcaccatcctctgccagtacaac
ttcctcagaaaacccccgagggtgccagtcagctgtcagcctattgacgatgatgatgta
gacgtggcctgtgagagacgaagagtgcttcgaggagatgccgataacgacatgctgaag
attgagaacctgacgaaggtgtataaatccaggaagatgggtcgtatcctggcagtggac
cggctgtgtctgggcgtccggcctggagagtgctttggactgctgggtgtgaatggagcc
gggaagaccaccacgttcaagatgctgacgggagatgagtgcaccactggaggggaggca
ttcatcaacggaaacagtatcctgcgggacctgttacatgtgcagcagagtgttggctac
tgtccacagtttgatgccctgtttgatgacctgacagccagggaacatctggagctctac
actcggcttcgtggcattccctggaaggaccaggatagggtggtgcagtgggcattagaa
aagttggagctgtcaaaatacgcagacaagcctgcctgtacttacagtggaggaaacaaa
cgcaagctttccactgccattgctctgattggatacccctcactcatcttcctggatgag
cccacaactgggatggacccaaaggcccgaaggttcctctggaatttaatcctggacatc
atcaagagcggacgctcagtagtgctgacgtcacacagtatggaggagtgtgaggctttg
tgcaccagactgggtattatggtgaatggcaggtttaaatgcctgggcagcatccagcac
ctcaagaacaggtttggtgatggttacatgatcacagtgaggaccaagagcagctccagc
gtgaaggaggtggttcgattcttcaacagaaacttccctgaggctgtgctgaaggagcgt
caccacaccaaggtccagtaccagctgaagtcggagtggatctctctggctcaagtcttc
agtaagatggagcaggtggtggaggtgctgggtatcgaggactactctgtcagtcagacc
actctggataatgtgtttgtcaactttgcaaagaagcagagtgacaacttagagcagcag
gaggtgctgcccccaggtggtgcacagtcgcccctgcagcacatcttaaacctgctgaag
tctcggccggccaacacagagctcaatgctctgatcagcgaggcgccggaggagctggag
agcgacgatgatgaaggactgatcagctttgaagaggaaagggtgcagctctccttcaac
acagacactctctgttga
DBGET
integrated database retrieval system
