Hippoglossus stenolepis (Pacific halibut): 118115104
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Entry
118115104 CDS
T08308
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118115104 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118115104 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118115104 (spaw)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Transforming growth factors (RSTK binding)
118115104 (spaw)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
GBD_Tenm3
Citrulline_exp
Motif
Other DBs
NCBI-GeneID:
118115104
NCBI-ProteinID:
XP_035021957
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All DBs
Position
9:16130405..16132758
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AA seq
411 aa
AA seq
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METRVLTVFCTLLLGSLGNIFSGRAHRSRDGLERSLSFRNLSVNHRSRYPLYMMQLYRSF
RTVDSSSPVAVNAVNTPADNPSAYSSDSVLSLKAKSCHQVGDRWTVTFDMSAISASELVQ
LAELRISLPAFSASERATVDLYHSREQSCDPGSTSCQDNHLFLGSFGTSPSSTKSSWKVF
NVTALLKFWLYQGDRVSSQEASGEAGSGSGAGEERQTTDKSLFKNLGLRQRKINHSITNR
VMMVIFSKHNLPQEAHAAYSLIHTVENSKYVTVDRVSSDSQSRRHKRNRLERMRVAGGAA
PTAEPVQRPLCRKVDMWVDFDQIGWDEWIVHPKRFNAYRCEGDCPTPLDESFQPTNHAYM
QSLLRHRHPERVSCPSCVPTRLSPLSMLYYENDDLMLRHHEEMIVEECGCH
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagagtgctgacagttttctgcacactcctcctcggctctttgggaaatatt
ttctccggtcgggcccacaggtctcgcgacggccttgagagaagtctatcattcagaaac
ctctcagttaatcatcgcagcagataccctctgtacatgatgcagctgtaccgctccttc
aggaccgtcgattcctcgtcgccagtagctgtcaacgccgtcaacacgccagctgacaac
ccatcagcgtacagctctgactctgtcctaagtctgaaggctaaaagttgccaccaagtg
ggtgacagatggacagtaacatttgacatgtcagccatctctgccagcgagctcgtccag
ctggcagagcttcggatcagtctaccagcgttctctgcctccgagcgagccactgtggat
ttatatcactcccgggagcagagctgtgacccgggcagcacatcatgccaggacaatcac
cttttcctggggagctttggcacgtcgcccagcagcacaaagtcttcctggaaggttttt
aatgtgaccgctctgttgaaattctggctgtaccaaggagacagagtgtcaagccaggag
gcctccggagaggcaggcagtgggagcggtgcaggggaggagaggcagacaactgacaag
tccctcttcaagaatttgggattgaggcaaagaaaaataaaccattcaataacaaaccgg
gtcatgatggtcatcttctccaaacacaacctgcctcaggaagcccacgctgcatacagt
ctcattcacactgtggagaactccaagtatgtgaccgtggacagagtcagcagtgacagc
caaagtcgacggcacaaaaggaaccgactggaaaggatgagagtggctggtggagctgca
ccgacagcggagccggtgcagaggccgctgtgtcgcaaggtagacatgtgggtggacttt
gaccaaattggctgggacgagtggattgtgcatcccaagcggttcaacgcatatcgctgt
gagggagactgcccgacacccctggatgagtccttccagcccaccaaccatgcatacatg
cagagcctcttgcgtcatcgccatccagagagagtgtcttgtccgtcctgcgtgccaacg
cggctcagcccactctccatgctctactatgagaacgacgacttgatgctgcgtcatcac
gaggaaatgattgttgaggagtgtggctgtcactga
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