Hippoglossus stenolepis (Pacific halibut): 118115126
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Entry
118115126 CDS
T08308
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04217
Necroptosis
hsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118115126 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118115126 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118115126 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118115126 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118115126 (si:dkey-32e23.4)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
118115126 (si:dkey-32e23.4)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
118115126 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
118115126 (si:dkey-32e23.4)
RhoA-dependent endocytosis
118115126 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
118115126 (si:dkey-32e23.4)
Retention of mitochondria
118115126 (si:dkey-32e23.4)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118115126 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-GeneID:
118115126
NCBI-ProteinID:
XP_035021998
LinkDB
All DBs
Position
9:complement(11454041..11462378)
Genome browser
AA seq
678 aa
AA seq
DB search
METLIPTINRLQEVFLTVGAESIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNIAPLQERQKIENGNGMNQNASNSYSGVKAEEWGTFLHCKNQIFADFQQIRQ
EIETETERTSGENKGISPEPIYLKIFSPKVLNLTLVDLPGITKVPVGDQPEDIEAQVQEM
ILSFISNPNSLILAVSPANSDLATSDALKLAREVDPDGRRTLLVVSKLDLMDAGTDALEV
LLGRVIPVRLGIIGVVNRSQHDINTQKRLEDSMRDEQAFLQRHYPSLASRAGSRYLAKTL
SRLLMHHIRDCLPELKTRVTVLSAQYQTRLNSYGQPVEDHSATLLQIVTKFASDYCHTIE
GTARYIQTSELCGGARICYIFHETFGRTLQSIDPLGGLSELDILTAIRNATGPRPALFVP
EVSFELLAKRQIKRLEEPSLRCVELVHEELQRIIQHCSSYSTQELLRFPKLHDSIVEVVT
GLLRKRLPITNEMVHNLVAIELAYINTKHPDFADAAQVSASVNSQQISHCQAEALDGGKR
WKNEKVAEEKAPPAGFGSPSKGQAINLLDTAVPVSRKLSSREQRDCEVIQRLINCYFLIV
RKSIQDSVPKTVMHFLVNFVKEHLQSELVGQLYKQTLLQDLLIESEDTAQQRTEVAQMLE
ALKKANNIISEIRETHLW
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctgatccccaccatcaaccggctgcaggaggtcttcctcacagtgggtgca
gagagcattcagctgcctcagattgtcgtggttggatctcagagcagtggaaagagctcc
gtgcttgagagcctggtcggacgggacttcttgcctcgaggatcaggaatagttaccaga
cgaccgctggtgttgcagctagttaatattgcccctctgcaggagagacagaagatcgag
aatggaaatgggatgaatcaaaatgcctcaaacagctactcaggtgtcaaagctgaagaa
tggggcacattcctgcactgcaagaaccagatctttgcagattttcagcaaatccgtcag
gaaattgaaacagagactgagcgcacttcaggcgagaacaagggaatcagccctgagccc
atatatttgaagattttctctcccaaagtccttaatctcactctggttgatttacctgga
attactaaggttcctgttggggaccagccagaggacattgaggctcaagtgcaagagatg
atcttgtccttcatctcaaatccaaactccctcatcctcgctgtgtcccctgccaactcc
gacttggccacctctgatgcactgaaattggcccgtgaggttgatccagatggtcgtcga
acgctgctggtggtcagtaagctggacctgatggatgcaggcactgatgctttagaggtc
cttctcggccgagtcatcccagtcaggctcgggatcatcggggtggttaacaggagccaa
catgacatcaatacccagaagagactggaggactcaatgagggatgagcaggccttcctg
cagcgccactacccctcgcttgcctcccgcgctggctcacgttatttggccaaaactctc
agcaggcttctgatgcaccacatccgggactgcctcccagaactcaaaacccgggtgacc
gtgcttagtgcccagtaccagacaaggctcaacagctatgggcaaccggtagaggaccac
agcgccaccctgctgcagattgtcaccaagtttgccagcgattactgccacaccatcgaa
ggaacagccagatacatccaaacctcagagctctgtgggggtgctcgcatctgttacata
ttccatgagacctttggccgcactttgcaatccatcgacccccttgggggactgtctgag
ctcgatatcctcaccgccatccgcaatgctacgggtccgcggccggcactttttgtgccc
gaggtgtcctttgagctgctggcgaagcggcaaattaagcggctggaggagccgagtctc
cgctgcgtggagctcgtccatgaggagctgcagaggatcatccagcactgctcctcctat
agcacgcaggagcttctgcggtttcccaaactgcacgactccattgtggaagtagtgact
ggattattgcggaagcgtttgccgattactaatgaaatggtacacaatttagtagcaata
gagctcgcctacatcaacacaaagcatccagacttcgcagatgcagcgcaggtctcagca
tctgtcaacagtcagcagatttctcactgtcaggcagaggccctcgacggagggaagcgc
tggaagaatgagaaagttgcggaggagaaagccccgcctgcaggctttggcagccccagc
aagggccaggccattaacctcctcgacacagcggtgcccgtgtcccgcaagctgagttcc
agggagcagagggactgtgaggtcatccagcggctcatcaactgctacttcctcattgtc
cgcaaaagcatccaagacagcgtgcccaagacagtgatgcacttcctggtgaactttgtg
aaagagcatctgcagagcgagctggtgggtcagctttacaaacagacactgctgcaggac
ctgctcattgagtcagaggacacggcacagcagaggaccgaggttgctcaaatgcttgag
gcgctcaaaaaggccaataacatcatttctgagatccgagagacccatctgtggtag
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