Hippoglossus stenolepis (Pacific halibut): 118115155
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Entry
118115155 CDS
T08308
Symbol
cacng5a
Name
(RefSeq) calcium channel, voltage-dependent, gamma subunit 5a
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04260
Cardiac muscle contraction
hsp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118115155 (cacng5a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118115155 (cacng5a)
04261 Adrenergic signaling in cardiomyocytes
118115155 (cacng5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118115155 (cacng5a)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118115155 (cacng5a)
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GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
SUR7
DUF716
DUF4064
Motif
Other DBs
NCBI-GeneID:
118115155
NCBI-ProteinID:
XP_035022043
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Position
2:complement(12568317..12587209)
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AA seq
277 aa
AA seq
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MSICGRKVLTLLSSVFAVSALGLLGIAVSTDYWLYLEEGVILPLNQSTEIRMSLHSGLWR
VCFLVGEEKGRCFTIEYVMPTNVQMTSESTVSVLKMIRSATPFPLVSLFFMFIGFVLSNI
GHIRPHRTILAFVSGIFFILSGLSLVVGLVLYISNINDEMLNRTKTNDAYFSYKYGWSFA
FAAISFLLTEGAGVMSVYLFMKRYTAEEMYRPHQGFYRPRLSNCSNYSGQFLHPDAWAGR
GRSASSISSEASLQMNTSNYPALLKCPDYEQMSSSPC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatgtggcaggaaggtgctgacgttgctgagcagcgtgttcgctgttagcgcc
ctgggcctgctggggatcgccgtgagcaccgactactggctgtacctggaggagggcgtc
attctccccctcaaccagagcaccgagatacgcatgtccctgcactctggtctctggagg
gtttgcttcctggttggggaggagaaaggtcgatgttttaccatcgagtatgtgatgccc
accaatgtccagatgacatctgagtccactgttagtgttctcaagatgatccgctctgcc
acacctttccctctggtcagcctcttcttcatgttcatcggttttgtgctcagcaacatc
ggccacatccgacctcatcgcaccatcttggcctttgtttctggaatcttctttatcctg
tcaggtctgtctctggtcgttggtctggtcctgtacatctccaacattaatgacgagatg
ttgaacaggaccaaaaccaatgatgcctacttcagctacaagtacggctggtcgttcgcc
tttgctgccatctccttcctgctcactgagggggccggagtcatgtcggtgtatctgttc
atgaagcgctacacagcggaggaaatgtaccggccccatcagggcttctaccggccccga
ctcagcaactgctccaattactccggccagttcctccacccagacgcctgggccggtcga
ggccgcagtgcctcctccatctcctccgaggcctccctccagatgaacacctccaactac
cctgccctcctcaagtgtccggactacgaacaaatgtcctcctcaccgtgctga
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