Hippoglossus stenolepis (Pacific halibut): 118115229
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Entry
118115229 CDS
T08308
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118115229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118115229
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
118115229
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF5817_CT
Peptidase_U4
ZapB
Motif
Other DBs
NCBI-GeneID:
118115229
NCBI-ProteinID:
XP_035022145
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All DBs
Position
9:complement(14203451..14227034)
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AA seq
293 aa
AA seq
DB search
MSGTVRQITITTDPSTPYFLRVDWAEDLGAGFTLALTDGSSAWIGEVSEDEVTKEASELG
VTRENYVKDLLLALTRSGKGRGGRRRGSDKKAYSFHLTPDHCHLSYQKFCDDITVDLGSV
ELQPAPDPLELNREMIGQSLKRSTDLQSENCRLLEENCGLKQEHHRILTELEKHVQDKKM
MEKKLYSRFVLVLNEKKAKIRGLQDTVHQLQQTADKQHSDDEATVDEDGSQNRGEETVPS
SHPSQEQTILITGRNLVCHGVTVDHTFSDNEDVQPRRKRRLLRAPSTESSEQE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacagtccgccagatcacaataaccactgatccaagtaccccctacttcctg
cgagtggactgggcagaggacctgggtgctggatttacattagctctcactgatggcagc
tcggcgtggatcggagaagtttcagaagatgaggtgacaaaggaagccagtgaactggga
gtcacaagagaaaactatgtgaaggatcttcttctagcactaacaaggagtggtaaagga
agaggaggacgacggagagggagcgacaagaaggcgtattctttccacctgactccagat
cactgtcatctctcatatcagaagttctgtgatgacatcacggtggacttgggctcggtg
gagctccaaccggctccagaccctctagagctgaaccgggagatgattggccagtccctg
aagcgcagcacagatctgcagtcagaaaactgccggctactggaggagaactgtggactg
aaacaggagcaccatcgaatactcacagagctggagaagcatgttcaggataagaagatg
atggagaagaagctttactcacgttttgtcctggtgctgaatgagaagaaggcgaagatc
cggggcctgcaggacaccgtccaccagctccaacagaccgctgacaagcagcacagtgac
gatgaagcaactgtggatgaagatggcagtcagaacagaggagaggagaccgttccgagc
agccatccatctcaggagcaaaccatcctaatcacaggtcgtaatcttgtgtgccacggc
gtcactgtggaccacacgttttctgataacgaagacgtacaaccgagacggaagcgcagg
ttacttcgcgctccaagcaccgagtcctctgagcaggaataa
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