Hippoglossus stenolepis (Pacific halibut): 118115290
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Entry
118115290 CDS
T08308
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118115290 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118115290 (ttc37)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
118115290 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_14
TPR_8
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
Fis1_TPR_C
TPR_MalT
TPR_15
COG4_N
Motif
Other DBs
NCBI-GeneID:
118115290
NCBI-ProteinID:
XP_035022261
LinkDB
All DBs
Position
9:12331024..12346323
Genome browser
AA seq
1573 aa
AA seq
DB search
MCDHKMSSKEVKTELKSAREAIKNKEYKAALRHCKAVLKLEKNNYNAWVFIGLAASELEQ
PDQSQSAYKKAAELDPEQLLAWQGLANLYDKTDQWDFKIELPNIYQKLVDLYASSDKKKC
YEVIQKLSDIYLSDKEYLKLAKVWLQLIQLKEEEAVDKTELLQLWQEMIQLLSDGINEKE
QDNETQQHLITAFENTIVLVDPVPGEKHKKISADFINCLSKLPQEENKMKKACESMLTHY
PKQSYPLEVLCSHYLKTGILIDDTISCFSRLLDLAPDSGLGHLGLGTKALQEGRYTDAIK
ELSQGLKKMSCSTGWYSLAEAQVKVHRYSDSATSCCQGLAKCVTGDKELKVKLLRLKLET
LVRSGGEKAADDALDTFSQIPDAVKDQVLVALKGRAYVNKGQIDQALKVSSELVASNPNL
DQGLALRGLVHSAEGQHQLAEQSFLKAATLSPNCAEYYFLLGQLYWDMGEETRKDRGKAQ
THLLKAAKIDPHLGCVFLYLGHYYREIATDRGRARGCYKKAFELDDEDSESGSASVDLSM
EMEDMDTALATLESVIEKATPGSAKWAWMRRGLYYLKVGEHQQAVSDLQAALRADPDDWV
CWECLGEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAAAEYLQIT
AQQDYVPALKGLGECQLSLAKCLMEDCRDGGAIDLIQQAIKNLFRAMELRPGLSCLWKLL
GDACTTVSSVSTNRAQVLMPALLAGLDPNAESHVLNQAQTLKVGERCYAHALKLVSEAPS
LWYDLGLNYYHQAKLPISSEGDQNSQSLVLEKAQQCFKKAIMMDCENHSYWNGLGAISMN
KGLENFALAQHCFIKSIQVEPNNVVAWTNLGSLYLKKDNIELAHEAFKIAQSLEPLYVNC
WIGQALIAERVGSYDTMDLFRHTTELSTHVEGVKGYAFWVCSTLLDKSNRDSELYRYNIV
QMNAISAAHVVLCKYTERIQSDPEAFIMLGYLNEHLQLKRQALQAYQRAVELLKSTSSAE
ELAFALGCYGRALCTSGQWEEAVHVYNSTPLQELSDLTGLALAYWRAGFIPESTNAYERA
LAVTSSEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHGD
VTLAGAALTELLKQGSATGSVVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLW
ALLSRVIPQYYPRKANGGAVAGHVACLSSMTQGKRALLYSGVNQLASGRHSGEDVHRNAL
KTMQRAVLLCPDDPSAWAGLMAACHTENTACYLSGSAPCRQGLEKTLMSVVSEKVHGVEE
IERPLAQSLEGWVLQQAVTGLMLGGQLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLL
VADGGNVLPDSVLEQLSNTVMMNRTNLGAWHWLAEVYRRQGLLVQAVMAYRQSLQLALQL
GLHSGQMASLLRLALLALGPCMAGAPGNEWKDLVVEATTEVLKLGSSPVANLFQALLQYV
TKMAARETRRLLERLVYASSQDLPVTVVQVASWYLLRHLYAKNDPELINVLLQHAKMKGD
QRLLEFNSLLASS
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaccacaagatgtccagtaaagaagtgaagacggagctgaaaagtgccagagag
gccattaaaaacaaagagtacaaagctgctctgagacactgtaaggctgttttgaaactg
gagaagaacaattataatgcctgggtgttcatcggcctggcagccagtgaactggagcaa
ccagatcagtcccagtcagcctataaaaaggcagcggagctggatcctgagcagctactg
gcatggcagggcttagctaatctttatgacaagacggatcagtgggatttcaaaattgag
ctacccaacatttatcagaagcttgttgatctatacgccagctcggacaaaaagaaatgt
tacgaggtgatccaaaagttgtcagatatttatctgtctgacaaagaatatttaaagttg
gcaaaggtttggctgcagctcattcagctgaaagaggaagaagctgtggacaagacagag
ttactgcagctgtggcaggagatgatccagctcctctcagacggcattaatgagaaagag
caggacaatgaaacacaacagcatttaatcacagcttttgagaacaccattgttctggtg
gaccctgtaccaggagagaaacacaagaagatctcagccgactttattaattgtctctct
aaactgccgcaagaagaaaacaaaatgaaaaaggcttgtgagtccatgctcactcactac
cccaaacaaagttatcctcttgaggtcctttgttcgcattacctcaaaacaggtatcctg
attgatgatacaattagctgcttctcccggctcctggatctggcccctgactctgggttg
ggtcacttgggtctgggcactaaagcacttcaggaaggaagatatacagacgccataaag
gaactttcgcaagggttgaagaagatgagctgtagcacaggatggtacagtctggctgaa
gctcaggttaaagtgcacagatactcggacagtgctacttcatgctgccaaggtctggcg
aaatgtgttactggagacaaggagctgaaggtcaaactgctgaggttgaagcttgagact
ttagtcagaagtggaggagagaaggctgcagatgatgctttggacaccttttcacaaatt
ccagatgctgtaaaagaccaagttctcgttgcccttaaaggacgtgcatacgtgaacaaa
ggacagattgatcaagcacttaaggtatcatcagagcttgtggcctccaacccaaacctg
gaccagggtttagctctgagaggactggtgcattcagctgaaggtcagcatcagcttgca
gagcagagtttcctgaaggcagctaccctgagcccaaactgtgcagagtactattttttg
ctgggacaactctactgggacatgggagaagagacccgtaaagaccgaggcaaagctcaa
acacacttgctaaaggcggcaaagatagatccacacctcggctgtgttttcctctacctt
gggcattactacagggagatagctactgatcgtggtcgtgcacgaggctgttataagaag
gcctttgagttggacgatgaggattctgagtctggaagtgcctcagtggatctcagtatg
gagatggaggatatggacactgccttagcaacactggagtcagtgatagagaaagccact
cccggttcagctaaatgggcctggatgagacgaggcctttactacctgaaggtcggggag
catcaacaggctgtctctgatctgcaggcagctctgagagcagaccctgatgactgggtg
tgctgggagtgtttaggcgaggcctacctaaaccgccggagcttcacggctgcgctgaag
gcatttggtaaggcccatcaacttcagccctcctccatctacagtgtttaccaggctgct
gcgatcaaacagaccctgggcaagttcaaagaggcggccgcagagtacttgcagatcaca
gcacagcaggactatgttcctgctcttaaaggactcggggagtgccagctgtctctggca
aaatgtttgatggaggactgcagagatgggggagccattgacctcattcagcaagctatt
aagaacctcttcagagccatggagctgcgtccaggcctgtcctgcttgtggaagctgctg
ggagatgcatgcaccacagtcagcagtgtttcgacaaacagagcacaagttcttatgccc
gcgctgttggctggtttagaccccaacgcagagagccacgtgctgaaccaggcccagaca
ctcaaggtcggcgagaggtgctatgctcatgctttgaagctggtgtctgaagcccccagc
ctttggtatgacttaggactcaactattatcaccaggcaaaactgccaatttcttccgaa
ggagaccagaactcccaatctctggtcctagagaaagctcagcagtgttttaagaaggcc
atcatgatggactgtgagaaccatagctactggaatggcctgggggcgatttccatgaac
aaaggtcttgagaactttgctctggctcaacattgcttcatcaagtccatacaagttgag
ccaaataatgttgttgcctggacaaaccttgggagcctctatttgaagaaggacaatata
gagctcgcacacgaggccttcaagattgctcagtccctggagccgctgtatgtcaactgc
tggattggacaggcgctgatagcagagagagtgggaagctacgacaccatggatcttttc
aggcacaccactgaactcagtacacatgtggagggagttaaaggttatgccttctgggta
tgttccaccttgctagataagagcaacagagactctgaactgtaccgctacaacatagtc
cagatgaatgccatctctgctgctcacgtggttctctgcaagtacacagagaggatccag
tctgaccccgaagccttcattatgctgggatatctgaatgagcatctgcagctgaagaga
caggccttacaggcttaccaaagagctgttgaactgctgaagtccacatcctcagcagaa
gaactggcttttgctctgggctgctatggccgcgctctgtgcacctcaggccagtgggag
gaggcggtgcatgtttataattccactccactgcaggagctcagcgatctgactgggttg
gctctggcctactggagagcaggattcattccagagagcaccaacgcatatgagcgtgcc
ttggctgtgacgtccagtgagaaggagaaagcatacatcctgacagctctggccctgctg
cagcaccggcagggcaacctggactcagccaagactctgctgtttaaatgctcaatgtta
aaggagcccatctccgagtctctgctgtgtttatgtgccctcgggttggtccacggtgat
gttacactcgccggtgctgccctgaccgagctgctgaagcagggttcagccactgggagt
gttgtagagcagcggtgtttactcacctgcaccttgctggccctgcagggcaactacagt
gcagtgcaaagagaggcctccagagctgtacacagcaatcctggaaacccctccctctgg
gccctgctgtccagagtgataccacagtactatcccaggaaggcaaatggtggagcagtg
gctggtcacgttgcctgtctctccagtatgacccaaggaaagagggcgctgttgtacagt
ggtgtgaaccagctggctagcggaagacactcaggagaggacgttcacaggaatgcactg
aaaactatgcagagagctgtgctgctctgtcccgatgatccatcagcatgggcgggatta
atggctgcctgtcacacagaaaacacagcctgctatctctcaggttctgctccctgcaga
caaggactggagaaaaccctcatgtcagtggtttctgagaaagtgcatggtgtggaggag
atagagcgccctctagcccagtctctggagggatgggtactacaacaggcagtgactggt
ctcatgttagggggacagctggagcaggcagaagccctctgctcacaggtcctaaatgtt
tcgccagaacacccagcagtgatgctgtcactgagacaggtgcagtgtcagcgcctcctt
gtggccgatggtggtaatgtcctcccagactccgtgctggagcagcttagcaacacggtg
atgatgaaccgcaccaacctgggggcatggcattggctggctgaggtgtatcgtaggcag
ggtctgctggtgcaggcagttatggcttacaggcagagtctgcagcttgccttacagctc
ggcctgcacagcggccagatggccagcctcctccgattggccctgctagctctaggaccc
tgtatggcaggggccccaggaaatgagtggaaggacctggtagtagaagccactactgag
gttttgaagctgggctcatcccctgtggctaacctcttccaggccctgctccagtatgtg
accaagatggcagctagggaaacgagacgtttgctggagaggctggtgtacgcttcctct
caagacctcccagtgacggtggtgcaggtggccagctggtaccttctcagacacttgtat
gccaaaaatgacccggagctgattaatgtgctcttgcaacatgccaaaatgaagggagat
cagagactgttggaattcaattcgctcctggcctcgtcctga
DBGET
integrated database retrieval system
