Hippoglossus stenolepis (Pacific halibut): 118115430
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Entry
118115430 CDS
T08308
Symbol
si:ch211-166a6.5
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hsp03012
]
118115430 (si:ch211-166a6.5)
Translation factors [BR:
hsp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118115430 (si:ch211-166a6.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
GSKIP_dom
TPR_4
Motif
Other DBs
NCBI-GeneID:
118115430
NCBI-ProteinID:
XP_035022462
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All DBs
Position
9:complement(15009046..15021160)
Genome browser
AA seq
1439 aa
AA seq
DB search
MKDKIRRGGGRNPAKTDVIHEKNAVGIKQVDDTSFTVKIQGAGVESFELQVHGFWLVQDA
LMGLLSRNEVCPRSNLSLAFASATLDPLAELQSLKGLKPGAIIRLVEEPYTASSARLHLA
RVVELLRASGPQDALREGRSPSLLETLTHQTTGADPSSPNGKSLKRSLSNTKTDSTNQDA
APPEYLLPGSTERPLMALLPPSSQPEAPSYLKDLCLSCWNPPPGHRKLQGDFLYISVVTM
EGKRCDITSCPKGFFLNRSTEDVFDPRPAQSSAVYHCFTELLCHISPAFKKTLTAIKNRP
QLPPAEVMPTSYYTLSWLGPHGASRTHKNTFSRLGVDEQASPDWNEELQAARDLPQGSLE
ERLQRDRAVLQVNSAFVKVVMQGAETVVDGFVEPANGNPEDPAFLWGGLFMSQGAASAVF
GGERGRRAAQRLELKGVQAYSGLEGLEGLHTLPTAIVDYRGVRMSAQGLAPGLEGTDQEQ
EKDQDQDQDQDQDQGTSQASRGLLYGVNAGPQESPHRRRLLVLLAHAAKCLALQRHVVVA
PSGYKVPLFTPADSQGLLGADGRFYILDVFRCFPADANFCPGAETESQIVTREEERKECK
EGDEEKKSDVKESWPENYHTDSGFPKSFPHSLCRLRPELVQAFVQHKHCQFTQRVRETLD
ENGGFEECATACDSRATNAVRAACKDVGSCSDIIFEIRLNPNVFSPGVSFPHSERASVNQ
QERLLKEAAALIITHQIPEFVEHCLQNYEAPMDGASLKQGLHQRGINLRYLGHVVKAISQ
SEHKEHLRHILRLVVGEVFIRSTRRVFNSFLQGVDVPSLCAAVSHFLCCLLVPHFAPAHV
GEETKKKSRRRARGAGASESTPWSTLTGPELWNLVCQDAAETYNISDSLGSGPNHLVEQY
GLQKLSLLREFCLKTGVQLRLRDYYLDNMNKAPIGPDDIVNIFPVVKHVDMMTVDASKAF
HAAKNFIQKGLLDQAHERLKEASYLFGRVCDDLHPEACHCHSLLARVAFLQGKAAEARSV
QLKAVVISERVLGFDHPNTIQQYTLLGVYMYAGGETALAQKCLLRARLLLLTVHGEDHPY
TATLDSCLGLVLTGDQTGQFLKNALRLNTSFFGATDLQTALSQHLLAQWMCSKGDYRSAM
THEKEALTAFTSLFGEDHPQTSCSKEFLCTITKQAVQVERSLRQAGADSTEQTVECLTPS
TETSLEQMVLVTGIRKITQSNRFQEYKQRHLERKAAALKELGLGLPGELFASATLKAGEK
SPDKETGCGKEAEDGGSPAVENNSERQHEQLVDEVSVVGAAAVSVNGHVVEPAEQNKHEE
KTENREEGDRATEVKMVNGESEVRAAGEETESSVEKEVTSSTANGEIEPEATCEEMKSEE
KGGESNGVRDTKATPLVLKNKGTWADVVSKSSIVNGTGHKDTVVNGVADKVTANGVAEE
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaaataaggagaggaggaggaagaaatccggccaaaactgatgtaatccat
gaaaagaatgctgttggtataaaacaagttgatgacacatcattcactgtgaagatccag
ggggcaggagtcgagtcatttgagctgcaggtccatggattttggctcgtccaggatgca
cttatgggcctgctttcgaggaatgaggtgtgtccacgctccaacctgtcattggcattc
gccagcgcaactctggatcccctcgcagagctgcaaagcctcaagggcctgaaacccgga
gccatcattcgccttgtggaagagccctacactgccagctcggcccggctccatctggct
cgagtcgtggagctgctgagagcatctgggcctcaggatgcactgagggagggacgctca
ccgagcctgctggagacactcacacatcagactacaggtgcagaccccagctcaccaaat
ggaaagagcctgaaacgctctctgagcaacacaaaaacggattcaaccaaccaggatgca
gctcctcctgagtacctcctccctggttccacagaaagaccactcatggccctgctgccg
cccagctcccagccagaggcccccagttacctgaaggacttgtgtctgagctgctggaac
ccgcctccaggtcacaggaagctgcagggagacttcctgtacatatctgtggtgacaatg
gagggaaaacggtgtgacatcacatcttgtccgaaaggttttttcctcaacaggtctaca
gaagatgtgtttgatcctcgtcctgcacagtcgtctgcagtttatcactgtttcactgaa
ctgctctgtcacatcagtcctgccttcaaaaaaactttaactgcaattaaaaacaggcct
caattaccaccagcagaagtgatgcccacttcttactacacgctgagctggctcgggcct
catggggcctcgcgcacccacaaaaacaccttcagccgactgggagtggatgaacaggca
agtccagactggaatgaggagttgcaggcagccagagatctccctcaaggcagcctggag
gagcggctgcagagagacagagctgtgctccaggtgaacagtgcatttgtgaaggtcgtc
atgcagggggcggagaccgttgtagacggcttcgtggagcctgcgaatggaaacccagag
gacccagctttcctgtgggggggtctgttcatgagccagggggcagcaagtgcagtgttt
ggtggggagaggggtcgcagggcagctcaaaggctggagctcaaaggcgtacaagcttac
agtggcctggaggggctggaggggctgcacacactacctacagccattgtagactacaga
ggagtacgtatgtctgcccagggtctggctcctggtttggaaggaacggaccaggaacag
gaaaaggaccaggaccaggaccaggaccaggaccaggaccagggaacttctcaagcatca
agaggcttactgtacggggtcaatgccggaccccaagagtcccctcatcgcaggcggctg
ctcgtgctcctggctcatgctgccaagtgtcttgctctccagagacatgttgttgtggcg
cccagcggttacaaggtaccactgttcacaccagcggattcccagggactgttgggagct
gacgggaggttctacatactcgacgtgttcaggtgcttcccggccgacgccaacttctgc
ccaggggcggagacagagagtcagattgtcactagagaagaggagaggaaagaatgcaaa
gaaggggatgaggagaagaaaagtgacgttaaagaaagttggcctgagaattatcacaca
gactccgggtttccaaagagctttcctcacagcctctgcagactgaggccagagctggtg
caggctttcgtccagcacaaacattgccagttcactcagcgtgtccgggagacgttggat
gagaatggaggctttgaagaatgtgcaacagcttgtgactctcgagccaccaatgcagta
cgagctgcttgtaaagacgtgggctcgtgtagtgacatcatctttgagattcgattaaac
ccaaatgtcttttctccaggagtatccttccctcattctgaacgtgcatcagtaaaccag
caggagaggctactgaaggaagcagcagctttaatcatcacacaccagataccagagttt
gtggagcactgcctacaaaactatgaggcaccaatggatggagcttctctgaaacagggg
ctgcaccagcgaggcatcaacctgcggtatctgggtcatgtggtcaaggccatcagtcag
tcagagcacaaggagcacctgaggcatatattgagattggttgtgggtgaggttttcatc
cgctctacaagaagagtgttcaacagtttcctccagggcgtggatgtgcctagtctctgt
gcagctgtcagtcacttcctctgctgcctattggttccccatttcgcgcccgctcatgtg
ggggaggagacgaaaaagaagtcgaggcggcgtgctcgaggggctggggcctctgagagc
acgccctggagcacgctcacggggcccgagctgtggaacctggtctgtcaggatgctgct
gagacatataacatctctgacagcctcggctccggtccaaaccacctggtagagcagtat
ggccttcagaagctctctctgctcagagagttctgtttaaagacaggagtccagttgaga
ttgagggactactaccttgacaacatgaataaagcacctattggtccagatgatatcgtc
aacatcttccctgttgtcaagcacgttgacatgatgactgtggatgcttctaaagcattt
catgctgcaaagaacttcattcagaaaggtctgctggatcaggcccatgagcgcctgaag
gaagcatcctacttgtttggtcgagtgtgtgatgacctgcaccctgaggcctgtcactgc
cacagcctgttggccagggtggccttcctgcagggaaaagcagcagaggctcgcagcgtc
cagctgaaagcagtggtcatcagtgagagggtgctcggctttgaccatccaaacactatc
cagcaatataccctcttgggtgtgtacatgtatgctggaggagagacggccctggctcag
aagtgtctcctcagagctcgtctgctattgctaacagtgcacggagaagaccatccctac
accgcgacactggatagctgtctggggttggtgctgacaggagatcagacagggcagttc
ctaaagaatgctctgagactcaacacttcctttttcggcgccacagacttgcaaacggct
ctcagtcagcacctgttggcccagtggatgtgcagtaagggagactacagaagtgctatg
acccatgagaaagaggcgctcactgctttcacctcattgttcggtgaggatcatccccag
acaagctgcagcaaagagtttctgtgcaccatcaccaagcaggcggtgcaggtggagcgc
tctctcagacaggcaggagctgacagtacggagcaaacagtggagtgtctgactccttca
actgagaccagtttggagcagatggttctggtgaccggaatcaggaagatcacacaaagt
aacaggttccaggagtacaagcagagacacctggaacgaaaagccgcagctttaaaggaa
ctgggactagggcttcctggcgagctcttcgcctcagcgactctgaaggcaggagagaaa
agcccggataaagaaacaggatgcgggaaggaagctgaggatggaggaagcccagcggtg
gagaataacagcgagcgccaacacgagcagttggtggacgaggtgtcggtggtgggtgca
gctgcagtttcagttaatggtcatgtggtggagccggcggagcaaaacaagcatgaggag
aaaacagagaacagggaggaaggtgacagagccactgaggtgaaaatggtgaatggggag
tcagaggtcagggctgcaggagaggaaactgagagcagtgtagaaaaggaggtgacgagc
agcacagcaaacggggagatagaacctgaagcaacatgtgaggagatgaagtcagaggag
aaaggtggtgaatcaaacggagtgagggacaccaaggctacaccgttagtcctgaagaat
aaagggacctgggctgatgttgtttcaaaatcaagtatagtgaatggaacaggacacaaa
gacacagtagtcaatggagtcgcagataaagtcactgcgaatggagtggctgaggagtga
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