Hippoglossus stenolepis (Pacific halibut): 118115447
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Entry
118115447 CDS
T08308
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
KO
K10890
fanconi anemia group C protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118115447 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118115447 (fancc)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
118115447 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
MIP-T3_C
Motif
Other DBs
NCBI-GeneID:
118115447
NCBI-ProteinID:
XP_035022485
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Position
9:complement(19518836..19543410)
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AA seq
586 aa
AA seq
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MSLLQPALQLRHTTEPLPSVQEEIQFWMDKAVAWGQADSPDTQRDTSLHLRRLSSYLQEL
LTHINNARSTTETMKRLPALGQLLGRLCWNPHVTADDMSRGLLFQCLWGLHSENPSDAVE
RKANQWIRKVLCQLSTEEDDAAAQKLMKRMGVPPKEYHLKVLTKMVAVLRENIGKSCSSP
GNINQRCSCDSILATSEACVPLVSCPEAAPLIGALLQRPATCVRAALSEDFLEALSSAFS
SKVLSLEDQAVVSLWIHSLSSLEEAVLSLLESVLSNTGSTPQRMVQHVSQSLLPKACAQH
CSIFLVLNDIFRSTLKQSEGNNSVNSLIQTFTSCFLRELALLQPQKCVSLKAFFPQSPQG
VLVPLLTLPSEMPQEAWRHHLNWLSSSLQRLTEEEEEGDGSSSTRGHQKVFEAWFLLVQC
AHWVQVSVQLLGTNGLEDRGPLLWLLTFYHHPTNRGHHRDLQLVQAREAWNHLHALFSAS
AHPPPGDRQQLLVALLSPRPQQPSLSPLLIFSLLLNFAVFSQQPLSCSTQVLHTVVRRSG
LVEEAACALRSLELRLNAGSCSSSDATRVHLRIEALQNTLTHMQAA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgctgcaaccagccctccagctccggcacacgacagagccgctgccgagtgtc
caggaggagattcagttctggatggacaaagcggttgcttggggccaggctgacagtcca
gacactcagagagacaccagcctgcacttgagaagattaagcagttacctccaggaactg
ctcacacatatcaacaatgcgagatccacaacagaaaccatgaagcggctgcctgccctg
ggccagctccttggccgactgtgctggaaccctcacgttaccgctgatgatatgagcaga
gggctgctgttccagtgtctgtggggactgcactcagagaatccaagcgatgctgtggaa
agaaaagccaaccagtggatacggaaagtgttgtgtcagctttctacagaagaagatgat
gctgcggcgcagaaattaatgaagcgtatgggtgtaccaccaaaagagtaccatctcaaa
gtcctgacaaagatggtggcagtgctgcgggaaaacattggaaagagctgtagttctccg
ggcaacataaatcagaggtgttcatgtgacagcatcctggctacatccgaggcgtgtgtc
cctctggtctcttgtccggaggccgcccctctcattggtgcactgctacagcgtccagcg
acttgtgtcagagcagctctgagtgaagacttcctggaggcactgagctctgccttctcc
agtaaggtcttgtcattggaggatcaggctgtcgtctctctgtggattcacagtctgtcc
agcctggaagaggccgtgctcagtctgctggagtctgttctgagcaacacggggtcaaca
ccacagaggatggtgcagcacgtgtcacagtctctgctgcctaaagcctgtgcacagcac
tgctcaatatttttagttttaaatgacatcttcaggtcgacccttaaacaatctgaagga
aacaactctgtcaattctcttatccaaacattcaccagctgttttctgagggaactggcc
ctgctgcagcctcagaagtgtgtgtcgctgaaggctttcttcccacagtcacctcagggt
gtgctggttcctctgttgaccctgccgtcagagatgcctcaggaggcttggagacatcac
ctgaactggctcagcagctcattacagagactgacagaggaggaagaggagggagacggc
agcagcagcaccagggggcaccagaaggtgtttgaggcctggttcctgctggttcagtgt
gctcactgggtgcaggtgagtgtccaacttctggggacaaacgggctcgaggaccgtggc
cccctcttgtggctgctgaccttctaccaccaccccaccaacagggggcaccacagagat
ctacagctggtacaggccagagaagcgtggaaccacctccacgccctcttctcggcctcc
gcccatccacctcctggtgaccgccagcagctgttggtcgctctgctgtcgccacgacct
cagcagccatccctgtctccgttactgatcttcagcctcttactcaactttgctgttttt
tcccaacaaccgctgagctgctcgacacaggttttacacacggtggtgcgtcggtctggt
ctggtggaagaagcagcgtgtgctctccgctcactggagctcaggctaaatgcaggaagc
tgctcatcaagcgacgctaccagagttcacctcaggatcgaggcacttcagaacacacta
acacatatgcaggcagcatga
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