Hippoglossus stenolepis (Pacific halibut): 118115484
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Entry
118115484 CDS
T08308
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118115484 (tfip11)
Spliceosome [BR:
hsp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118115484 (tfip11)
Other components
Complex C specific factors
118115484 (tfip11)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
118115484
NCBI-ProteinID:
XP_035022544
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Position
9:complement(14999633..15004561)
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AA seq
834 aa
AA seq
DB search
MSMSHLYGRREEEEEGVEIESFEVTDWDLANEFNPERRRHRQTKDQATYGIWADRDSDED
ERPSFGGKRSKDYTVPVSFVSAGLRKTEAEEKQQQKGEEDANDSEDDAPSAPSPPRSTAP
KKLQMQANFRKNQAQRFAGGVHSGQGIGNWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGI
INPIEAKVRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEFQKELGQWRKDPAGPIGK
KKPKYSFRTVDELKAKGKLAGRSTTVSAGELAQVKVIDMTGREKKVYYSYSQMSNKHSVP
DEAPPSLSTRDQKGTGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRT
LQTRLDAEQDSIQKMEAVLALVERFPSGETAPGEGPTLQECARIFETLQTDYYEEYKTMG
LSDLAVAVVHPLLKERLCSWDPLKDSSYCLEDIGQWRAILETRELHSSGPDSNMDPYHRV
LWEVWVPVMRTCVSHWQPRMVGAMVDCVEVWAPLLPLWILDNLLEQLILPRLQREVDNWN
PLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPNDTSARLILQPWKDVFT
PGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFT
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDVLLAQPLIKEKFNEALDIMNRAVSSGMG
GYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISTGGPTNFKDLIQTKAEE
NNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcccacctgtatgggcgcagggaggaggaggaggaaggtgtggagattgag
agctttgaggtgacagactgggatctggccaatgagttcaacccggaacgccgcagacac
aggcagaccaaggatcaggctacctacggtatctgggccgacagagactctgatgaggac
gagaggccgagctttggaggcaagagatctaaagactacaccgttccagtgagctttgtg
agtgctggcctgcgtaagactgaagctgaggagaagcagcagcaaaaaggagaagaagac
gccaatgattctgaggacgatgctccttcagcaccttccccccctcgcagcactgcaccc
aaaaaactgcagatgcaggctaatttccgcaagaaccaggcccagaggtttgcaggaggt
gttcactctggacaaggcattggtaactgggagaagcacacaaagggaattggtcagaag
cttctgcagaaaatgggctaccagccaggcaaaggcttgggcaagaatgcacaaggtatt
ataaaccccattgaggcaaaagttcggaaaggcaaaggagcagtgggcgcttatggaaat
gagcgaacgaagcagagtctccaggatttccctgtggtcgactcagaggaagaagaggaa
aaggagtttcagaaggagctaggccagtggcgtaaggatcctgcaggtcccattggaaaa
aagaaacccaagtactcctttagaactgtggatgagctgaaggctaaaggcaaactggcg
gggcggagcaccacagtatccgccggggagctggcacaggtcaaggtgatagatatgact
ggaagagagaaaaaggtttactacagttacagccagatgtccaacaagcacagcgtccca
gatgaagctccaccaagcctgtccactagggatcagaagggaactggctttgctttgcct
gagcttgaacataacctgcagctactgatagacctcacagaacaggacatattgcagtct
gccagacgtctccagcatgagaaagatgtagttgtgtccctgagccatgagtcaagaaca
ctgcagaccagactagatgcagagcaagattccatccagaaaatggaggccgtactggcg
ctggtggagcgttttccttctggggaaactgcacctggggagggacccaccctgcaggaa
tgtgcccggatctttgagaccttacaaacagattattatgaagaatacaagacaatggga
ttgtcagacttggctgtagcagttgttcatccgttactcaaagagagactttgctcttgg
gacccacttaaggacagctcttattgtctggaagacatcggccagtggagagcaatcctt
gaaactcgagaactccattccagtggcccagattcaaatatggacccttaccacagagtg
ttgtgggaagtgtgggtcccagtgatgcggacctgtgtgtcacactggcagcctcgtatg
gtcggtgcgatggtggactgtgtagaggtgtgggctcctcttctccccctgtggatcctg
gataatcttttggagcagctgatcttaccccgactgcagcgagaggttgataactggaac
cctctaactgacacagtgcccatccactcctggatccacccatggctgcctctgctccaa
tcacgtctagagcctctgtacccgcccatcaggagcaaactgtccaacgcattgcaacga
tggcatcccaatgacacgtcggcccgcctcatcctgcaaccatggaaagatgttttcact
ccaggtgcatgggaggcctttatggtgaaaaacatcattccgaaattagctttgtgtctg
gaggagctggttatcaaccctcaccagcagcagatggagccatttcactgggtgatggac
tgggagggcatgctgtccccctccagccttgtgtccctgttggacaaaaacttctttact
aaatggttgcaggtgttgtgttcatggttgagcaacagtcccaactatgaggaaatcact
aaatggtaccttggatggaaaagcatgttcagtgacgtcttgttggcacagccactcata
aaagagaagtttaatgaagctttggacatcatgaaccgtgcagtgtcttcaggcatgggt
ggatacatgcaacctggtgcaagggagaacattgcatatctcacgcagacagagagaagg
aaggacttccagtatgaagcaatgcaggagcgcagggatgcggagagcgtggctcacaga
ggcatcagcaccggtggtccaaccaactttaaagatctgatccagaccaaggcagaggaa
aacaatattgtctttatgcccttagtggccaaacggcatgagggcaaacagttgtacaca
tttggacgaatcgtcatctacattgatagaggggttgtgtttgtgcagggggagaagact
tgggtgcccacgtctttgcagagtctgatagatatggccaagtga
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