Hippoglossus stenolepis (Pacific halibut): 118115505
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Entry
118115505 CDS
T08308
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118115505 (zfr)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118115505 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
DUF4484
zf-U1
Motif
Other DBs
NCBI-GeneID:
118115505
NCBI-ProteinID:
XP_035022584
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All DBs
Position
9:16222..1178941
Genome browser
AA seq
1080 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPTAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAGTVAVARPAPVSVATAAAYGGYQPTHAAADYGYPQRQPEVPP
PPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAVAAAQTSVADSYYQTVPKPG
YSQGVTSYTQSQQARQVTVIKPAAPNPASSTFSIYPVTSTVQPVAAAASVVPSYSQSPTY
STNAVTYSGTSYSGYEAAVYSAASSYYHQQQQQQQQQQQQQQQKQAVAAVAATAAWTGNT
FTKKPPFQSKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQS
SSSSNSGGGVLARSAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPST
EPSMVTQTSSSTTAAPSKTTTATLSSSSTTSSLCASASSSPATSSSPTYLKPVNIVSSGV
AGGKNPLANNLSSANSASAGKKVNTPKINFVGGNKLQTTVKIDEARAEAKVEASKPVMPS
SGAEDPKTEVSDSLSTSALAGLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPN
AKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERW
RMEMRRYEEDMYWRRMEEEQHHWDERRRLPDGGYPQGPPGPPGLLGVRPGMPGLQPQGPV
PPRRPDSSDDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKPKEDDKE
KKESSKDRALKGVMRVGVLAKGLLLRGDKDVNLVLLCSEKPTKDLLSRIMEHLPKQLTIV
APEKYEVKGSIQEAAIILTSCTDPKMQVTITLTSPLIREENGRDGDVTSGMVKDPADVLD
RQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSSFPGWGMELLVEKAI
SSASAPLSPGDALRRVFECISSGILLPGGPGLVDPCEKKPVDTLTPMGEQQREDITSSAQ
FALRLLAFRQIHKVLGMDPLPQINPRFNIRNSRKRRRDNSEGTDSFEGEGKKDKKDYENF
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtcctgtggtttccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaattattttggatttacccatggcgctgcggctcagtacagt
cagcagccaactgccggggtagcatatacacatcccaccacagtggccagttacacagtt
catcaagcacctgtggctgcacacactgtggcggctgcctatgctcccactgcaggcaca
gtagctgtcgctaggcctgcgccagtttccgtggctactgctgcagcttatggagggtac
cagccaacacatgctgccgctgactatggctaccctcagcgccagcctgaggtccctcca
cccccaccaccagtcacctcacagaactaccaggactcttactcctatgtccgttctact
gctccagctgtagcttatgacagtaagcagtattaccagcagcccactgctacagctgct
gttgctgctgcacaaaccagtgtggcagattcatactatcagacagtccccaaaccagga
tatagccagggggtaacatcatacacccagagccagcaggcacgccaggtgactgtgata
aagcctgctgctcccaatccagcctcatccactttctccatctacccagtgacctccact
gtccagcccgtggctgctgctgcctctgttgtcccttcttactcccaaagcccaacctac
agcacgaatgccgtcacctactctggaacctcatactcaggctatgaagctgcagtttac
tcggcagcttccagctactaccaccagcagcaacagcagcagcagcaacagcagcagcag
cagcagcagaagcaggctgtggcagctgtagccgcaacagcagcatggacgggaaacact
tttaccaagaagcccccctttcagagtaagcagcttcggcccaagcagccgcccaagccc
cctcagatccactattgcgacgtctgtaagatcagctgtgccggcccacagacatacaag
gagcatcttgaagggcagaagcacaagaagaaggaagcagcactgaaggtttcccagagc
agtagcagcagcaatagtggaggaggggttttggcccgcagtgctcagaaccagctgcgc
tgtgaactttgcgatgtttcctgcactggcgccgatgcctatgctgcccacattcgtgga
gctaagcaccagaaggttgtgaagcttcataccaagcttggaaagcccattccatctact
gagcccagtatggtcactcagacatcgtcttccaccacagctgcccccagcaagacaacc
acagccaccctgagcagttccagcaccaccagctctctatgtgcgtctgcttcctcctcc
cctgccaccagctccagtcccacctacctgaagccagtcaacatagtcagcagtggtgtt
gcgggtggcaagaacccattagccaacaacctctcttcagccaactctgcctcagctgga
aagaaagtcaacacccccaagatcaattttgttggtggaaataaattacagaccacagta
aagattgacgaagccagagcggaggccaaagtggaggcatctaagcctgtgatgccctct
tcaggtgctgaagaccccaagactgaagtttcagactctctgtccacatcagccctggct
ggactgcagagtgatgtccagccagtcggtcatgactatgttgaggaagtcagaaacgat
gaaggcaaagtcatccgcttccattgcaagctgtgtgaatgtagtttcaacgacccaaat
gcaaaggaaatgcatctcaaaggacgaaggcatcgtctgcaatacaagaaaaaagtcaac
ccagatctgcaggtggaggtcaagcccagcatccgagccagaaagattcaggaggaaaag
atgagaaaacagatgcagaaagaggagtattggagaagaagagaggaggaagagcgctgg
agaatggagatgaggcgttatgaagaagacatgtactggagacgcatggaagaggagcaa
caccactgggatgaacgacgtcgattaccagatggagggtacccacagggccctcctggt
cctcctggtctactcggagtccgacctggcatgcctggcctccagcctcaagggcctgtg
cccccacgccgtcctgattcttccgatgatcgttatgtcatgaccaagcatgcagccatc
tacccctcagaagatgagctccagtcaatccagaagattgtgtcaatcacagaacgtgcc
ctcaaacttgtctcggacataattacagaccaggacaagcccaaggaagacgacaaagag
aagaaggaatcctccaaagacagagccctgaagggagtgatgagggttggagtcctggcc
aaaggcttacttctgcgtggggacaaagacgtcaaccttgtcctgctctgctcagagaag
cccaccaaggacctcctcagccgcattatggagcacctccccaagcaactaacaattgta
gccccagaaaaatacgaggtcaagggatctatccaggaagcagccatcattctgacgtcc
tgtactgacccaaagatgcaagtgacaatcacgctgacttcacctctcatcagagaggaa
aatggccgggatggagatgtaacctcgggtatggtgaaagacccagcggacgtcttggac
aggcaaaaatgccttgacgctctggctgctctgcgccacgctaagtggttccaggctaga
gctaatggacttcagtcttgtgtgatcatcattcgaatcctacgagacctctgtcagcga
gttcctacatggtcatccttcccaggatggggcatggagctgctagttgagaaggccatc
agtagcgcctctgcccccctcagcccaggtgatgctctgagacgggtctttgaatgtatc
tcttctgggattttactccctggtgggccaggattggtggatccatgtgaaaagaagcct
gtcgataccctgacacccatgggagagcaacagagagaggacatcacctcaagtgcccaa
tttgctctgaggctgctggcattccgtcagatccataaggttttgggcatggaccctctg
ccgcagattaaccctcgcttcaacatccgcaacagccgcaagcgtcgccgtgacaacagt
gaggggacagacagctttgagggtgaaggcaaaaaagacaagaaagattatgaaaatttc
taa
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