Hippoglossus stenolepis (Pacific halibut): 118115512
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Entry
118115512 CDS
T08308
Name
(RefSeq) ubiquilin-1
KO
K04523
ubiquilin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118115512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118115512
03051 Proteasome [BR:
hsp03051
]
118115512
Membrane trafficking [BR:
hsp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
118115512
Proteasome [BR:
hsp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118115512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
UBA_NBR1_C
UBA_7
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
118115512
NCBI-ProteinID:
XP_035022598
LinkDB
All DBs
Position
9:17944291..17955781
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AA seq
537 aa
AA seq
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MSVRDELGASGGCQSSTDMIHVAVKSVSESRDFTVPCDCTVRQLKHDLSDKAGASAEQLL
LIHSGRVLTESQILSHLKGKSDAVSLCMIRRPQCSSAAADLSLETINQELTDVLDPDHDN
LTPSPISPLCLVDSLGLATGESGFFPALQHQMEKQLLDNPEMMRRVLGSPLVQSILSTSS
PQITRQLILSNPQIQNLLETNPEVGDMLNNTDIITEVLELVRNPDMIEEVMCNEDRAMDE
LKSERDNPEPINGDSDGLLKTEAEIQEHDLNLSQTGGPQVETISSGKQQAPKGERNQRPL
FSSQSTDPLRDLTATPTADPNPQSTVTAGMQSLLEEITASPGLMESLLSGPYVSSLLNCL
GQNPDLAAQMLLSHPLFSGNPELQQQMRQQLPLFLQQMQSPELLSAMLNPRAMEALLQIQ
QGLQTLAAEAPALIPAAGLGNTGARVDVAPELESNSFLNSHSGNCPPVATVTEQQQTFVQ
QMLQALADNGGHREEAELQEELEHLSSMGFKDRQANLQALISTGGDLSTAIQHLIGL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgagggatgagctgggagcatcgggtggatgtcagagcagcaccgacatgatc
cacgttgccgttaaaagtgtcagtgagagcagagacttcacggtcccatgcgactgcacc
gtcagacagctgaagcatgatctctcggataaggcgggggcctcagcagagcagctcctg
ctgatccactccggccgagtcctcacagagtctcagatcctgagtcaccttaaagggaag
agtgatgctgtcagcctctgcatgatccgaaggcctcagtgttcctctgctgccgctgat
ctgtccttggagacgatcaaccaagagctcacagacgttctcgaccctgatcatgacaac
ctgacaccatctcccatctctcccctctgcctggtggacagtcttggcctggcaacaggc
gagtctggcttcttccctgcactccagcaccagatggagaagcagctgttggataaccca
gagatgatgcgtcgtgtcctgggcagccctttggtgcagagcatactctctacttccagc
ccccagataaccagacagctcattctgtccaatcctcaaatccagaatctcctagagaca
aatccagaggtgggagacatgctcaacaacacagacatcatcacagaggtgctggagctg
gtcagaaaccctgacatgatagaggaagtgatgtgtaatgaagaccgcgcaatggacgag
ttgaaatcagagcgagacaaccctgaacccatcaatggggactctgatggcctcctgaag
actgaagcagaaatacaggaacatgatctcaatctatcacagacaggaggaccccaagtg
gagactatctcatctgggaaacaacaggcccccaaaggagaaagaaaccagagaccgttg
ttctccagtcagtccacagatcctctcagagacctgactgccacacccacagctgaccca
aaccctcagagcactgtcactgcaggcatgcagtccctgctggaggagatcacggccagt
cctggtctgatggagagccttctctctgggccgtacgtcagcagtcttctgaactgcctc
ggccaaaacccggatctggctgcacagatgctgctgagccaccctttgttctctgggaat
cctgagctgcagcagcagatgagacagcagctccctctcttcctgcaacagatgcagagt
ccggagctgctgtcggccatgttgaaccccagagccatggaggctctgctacagatccag
cagggactacaaactctggctgcagaggctcccgccctcatacctgcggctggactcgga
aacactggagccagggttgatgttgcccctgagctcgaatccaactctttcctgaacagc
cactcaggaaattgtcctccggttgccacggtgacagagcagcagcagacgtttgtgcaa
cagatgctgcaggcactggctgataatgggggccatcgtgaggaggctgagctccaagag
gagctggagcacctgagctcgatgggcttcaaagacagacaggcgaaccttcaggccctc
atcagcacaggaggagacctcagcacggccatacaacatctgatcgggctctga
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