Hippoglossus stenolepis (Pacific halibut): 118115517
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Entry
118115517 CDS
T08308
Symbol
prdm8b
Name
(RefSeq) PR domain zinc finger protein 8b
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118115517 (prdm8b)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118115517 (prdm8b)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118115517 (prdm8b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118115517 (prdm8b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
Zf-C2H2_ZNF451_C
DUF5810
DUF1835
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
118115517
NCBI-ProteinID:
XP_035022614
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Position
9:26829861..26835756
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AA seq
565 aa
AA seq
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MEESSSQKLVWDGDAKAVQQCLTDIFTSVFTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTAPYIFRVDTSAANSTSEGLMWLRLVQSARDKEEQNLEAYVKNGQLFYRSLRRI
EKDEELLVWYGKDLIDLLLLSSSRAPAKSKGSSHYSCPDCSQRFQFEFPFLAHLRFRCTK
RLQSITGADEEPSKERSTERPNTTPTRSSPKLGRSEGFSSPQDTSKPSTDFHNLARDLEN
NRTSPPSDKEAEICSESSGKRKFSEIEECRAPSLTQTKSKDELATSAQNYRGVYGLEDNR
RPFSPPGSTGSGEVKRSAFTEVKKNAKHHSGSKNLQTSNSENKDGGRPSSNPSEKHLNIR
QVLSETQPAQTSPMGSAFTSVSQQGGGSGGERKSAFSQPSRSSFSQISPLVMPPKLLDCH
PAVGDTISSSRLYQADHLAAKLQGAELGANCPVPGGMAKQNPFVYTTAFWPKSSGPIQIQ
MPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEFAMEPLVKRRREE
KLKCPICNESFRERHHLSRHMTSHN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtccagctctcagaagttggtgtgggacggggacgccaaggcggtgcagcag
tgtctcaccgacatcttcaccagcgtcttcacgacgtgcgacatcccagaaaacgccatc
ttcgggccttgcgtgctgagccacacgtcgctgtacgacagcatcgccttcattgcgctg
aagtccaccgacaagcgcacagcaccttacatcttcagggtggacacctcagcggccaac
agcacctccgagggcttgatgtggctgcggctggtccagtcggcccgggacaaggaggag
cagaacctggaggcctacgtgaagaacggccagctcttctaccgctccctccgccggatc
gagaaggacgaggagctgctggtgtggtacggcaaggacctcatcgacctgctgctgctc
agctccagcagagcgccggccaagagcaaaggttcgtcccactactcgtgtccggactgc
agccagcgcttccagttcgagtttcccttcttggcccatctccggttccgctgcaccaag
agactgcagagcatcacgggcgccgacgaggagcccagcaaggagcggagcaccgagcga
cccaacacaaccccgaccaggtccagcccgaagctgggtcgctctgagggcttcagcagc
ccccaggacaccagcaaaccctccacagactttcacaacctggccagggatctagagaac
aaccggaccagccctccgagcgacaaggaggccgagatctgcagcgagagttcggggaag
aggaagttctcggaaatagaggagtgccgagcgcccagccttacacagaccaaatctaaa
gacgagcttgcgacgtctgcacagaattacagaggcgtgtacggcctggaggataaccgc
aggcccttctccccaccgggctccacaggaagtggggaggtcaaacgcagcgccttcacc
gaggtcaagaagaacgccaaacatcacagcggcagcaaaaacctccagacctccaactct
gaaaacaaagatggcggtcgtcccagcagcaacccgtcggagaagcacctcaacatccgg
caggtgctgtcggagacccagccggcccagacctcgcccatgggcagcgccttcacctcc
gtcagccagcagggaggcggcagcggtggcgagaggaagagcgccttcagtcagccatcg
cgttcctccttctcccagatctcgccactggtgatgccgcccaagctgctggactgccac
ccagcggtgggcgacaccatctcctcctccagactctaccaggccgaccaccttgctgcc
aagctgcagggggcagagctgggcgccaactgccccgtgccgggcggcatggccaagcag
aacccgtttgtctacaccaccgccttctggcccaaaagctccggacctatccagattcaa
atgccctcggcgctcaccctcctgccgccctccttcacctccctctgcctgccggcgcag
aactggtgcgccaagtgcaacgcctccttccgcatgacctcggacttggtttaccacatg
aggtcccaccacaaaaaggagttcgccatggagcctctcgtcaagcggcggcgcgaggag
aaactcaagtgcccgatttgcaacgagtccttccgggagcgtcatcacctgtcacgtcac
atgacctcccacaactga
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