Hippoglossus stenolepis (Pacific halibut): 118115536
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Entry
118115536 CDS
T08308
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03030
DNA replication
hsp03410
Base excision repair
hsp03420
Nucleotide excision repair
hsp03430
Mismatch repair
hsp04110
Cell cycle
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118115536 (pcna)
03410 Base excision repair
118115536 (pcna)
03420 Nucleotide excision repair
118115536 (pcna)
03430 Mismatch repair
118115536 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118115536 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
118115536 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsp03032
]
118115536 (pcna)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118115536 (pcna)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118115536 (pcna)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
118115536 (pcna)
MMR (mismatch excision repair)
Other MMR factors
118115536 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
118115536 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
118115536
NCBI-ProteinID:
XP_035022640
LinkDB
All DBs
Position
9:21710283..21713856
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctcgcctggtgcagggctccatcctgaagaaggtgctggaggctctgaag
gacctgatcaccgaggcctgctgggacgtcagctcgtccggcatctccctgcagagcatg
gactcctctcacgtgtccctggtgcagctcacactccggcacgacggcttcgactcgtac
cgctgcgacaggaacctggcgatgggggtgaacctcagcagtatgtcaaagatcctgaag
tgtgctggaaacgaggacatcatcaccctccgagcagaagacaatgcagacacactcgcc
ctcgtgtttgagacactcaaccaggagaaagtctcagattacgagatgaagttgatggac
ctggatgtggagcagctgggtattccagagcaggagtacagctgcgtggtgaagatgccc
tccggggagttcgccagaatctgcagagatctctcccagatcggcgacgctgtcatgatc
tcctgtgccaaggatggagtcaagttctccgcttcaggagagctgggaacaggaaacgtc
aaactgtcccagaccagcaatgtagacaaagaggatgaagcggtgaccatcgagatgaac
gagcccgtccagctgatctttgccctcaactacctgaacttcttcaccaaggccacgccg
ctgtccaagacagtcaccctcagcatgtccgccgacatccccctggtggtggagtacaag
attgccgatatgggacatgtcaaatactacctggcaccaaagatcgatgaagaggcttca
tag
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