Hippoglossus stenolepis (Pacific halibut): 118115575
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Entry
118115575 CDS
T08308
Symbol
abcb9
Name
(RefSeq) ATP-binding cassette sub-family B member 9
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp02010
ABC transporters
hsp04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118115575 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
118115575 (abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118115575 (abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118115575 (abcb9)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
118115575 (abcb9)
Transporters [BR:
hsp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
118115575 (abcb9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
AAA_30
AAA_25
PHF12_MRG_bd
nSTAND1
RsgA_GTPase
MENTAL
Motif
Other DBs
NCBI-GeneID:
118115575
NCBI-ProteinID:
XP_035022714
LinkDB
All DBs
Position
9:complement(4807922..4814883)
Genome browser
AA seq
812 aa
AA seq
DB search
MGIKVGVSCTVLFILLDVVITTVLYTHGSHFVRFMEDVRNFNILKSAFDLWGTVLLRVCL
LLGASIGVSWNKVDGPPRVASLTTLILFICLIVISFALTKLLILTELGPMTQQPWVLSLI
CWTCASSVVVMLLWRLLSSESSSVSRHHSSRSRGGVAGSEDTDSLVGTDGEEEQEVGCER
KKQKEEGTQEREKTSSGATLGRLIAISRKDGGLLCAAILFLFISAVCEAFIPFYYGRAIG
SIVESKSMAHFAKPVITLVALALVSSFAMGVRGGVFTLTFARINLRLRSRLFRTLMRQEI
AFFDENHTGDIISRLSADTTQVSDLISQNVNIFLRSAIKGTGSFIFMFGISWKLTLVTIM
GFPFIGLVSKLHGEYYKKLTKEVQTTLAEANRVAEETISGMRTVRSFANECGEADSYDAK
LLAMFQLNKKQALAYACYMWSSSISEFALEVAVLYYGGHLVISGQMSSGDLISLFIYMLE
LGECLESIASVYTGLMQGVGAAEKVFEYLDREPKHPADGTEAPHTCTGLVEFKDITFAYP
TRPEVDILKGVSFTLRPGEVTALVGPSGSGKSSCVSLLENFYLPQQGQVLLDGKPVHTFQ
HDYLHSKVALVGQEPVLFARTVEENITYGLTDIPMQYVVQAATKANAQDFISNLPKGYET
SVGEKGTQLSGGQKQRVAIARALIRNPRVLILDEATSALDAESEHIVQQALNNVMKEHTV
LVIAHRLSTVEKADNIIVIDRGHVAEQGPHSQLMASGGLYCKLVQRQVLGIQTGADILNL
PENLSWKPDGAHQRRRQSSSSSASESECKVRY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaagtaggtgtgagctgcactgtgttattcatcctactggatgttgtcatc
accactgtcctgtacacacatggatcacactttgtcagattcatggaggatgtgcggaac
tttaacatcctcaagtcagcgttcgacctctgggggactgtcctgctccgagtgtgcctc
ctcctgggagcctccataggtgtgtcatggaacaaggtggacggcccgccgagggtcgct
tcgctcaccaccctcatcctcttcatctgcctgatcgtcatcagctttgctctgaccaag
ctgctgatactgaccgagctgggccctatgacacagcagccctgggtcctgagcctcata
tgctggacttgtgcatcttctgtggttgtcatgctgctttggaggctgctgagctcagaa
tccagctcagtgagtcgtcaccacagcagcaggagcagaggaggagtagcaggctccgag
gacacagatagcctggtggggactgatggtgaggaggagcaggaggtggggtgtgagagg
aagaagcaaaaggaggagggaacccaggagagggagaagaccagctctggggctacactg
ggacgtttgatagccatctccaggaaggatggcgggctcctgtgtgcagctatcctcttc
cttttcatttctgctgtgtgtgaagcattcataccgttctactatgggagggccatcggc
agcattgtggagagcaagagcatggcgcactttgctaaaccggtcatcacactggtagca
ctggccttagtcagttcatttgcaatgggagtgcgtggtggggtcttcacgctgacattt
gctcgaataaaccttcggctcagaagccgtctcttcagaacgctgatgaggcaggaaata
gcgttttttgatgaaaaccacacaggtgacatcatctcacggctgtcagctgacaccacc
caagtgagtgacctcatctcccagaatgtcaacatcttcttgaggagcgccatcaagggc
accggctccttcatcttcatgttcgggatctcctggaagctcaccctggtgaccatcatg
ggattccctttcattggcctggtctctaaactccatggagaatactacaagaaattgact
aaagaagtgcaaaccactcttgcagaggccaacagagtggcagaagaaacaatttcaggc
atgaggacagtgcgaagctttgccaacgagtgtggggaggccgattcctacgacgccaag
ctcttagccatgttccagctcaacaagaagcaggccttggcctatgcttgttatatgtgg
tccagtagtatttcagagtttgctttagaggtcgctgtcctctactatggcggccacctt
gtgatttctggtcagatgagtagtggggacttgatatctcttttcatatacatgctcgag
ctgggagaatgtctagagagcatcgcgtcagtgtacacaggcctcatgcagggcgtggga
gctgcagagaaggtttttgagtatctggacagggaacccaaacacccagctgatggcaca
gaggctcctcacacatgcacgggtctggttgaatttaaagacatcacgtttgcctaccca
acccgccctgaggttgatattctcaagggagtgtcattcaccctgcggccaggggaggtc
acagccctcgtgggaccctcgggcagtggaaagagttcctgtgtgagtctgctggaaaac
ttctaccttcctcaacaaggccaagtgctactggatggaaaacctgttcacacgtttcag
cacgactacctacactccaaggtagctcttgtgggccaagagcctgtgctttttgccagg
acggtcgaggaaaatatcacctacggcctgactgacatccccatgcagtatgtggtgcag
gctgccaccaaggctaacgctcaggactttatcagcaacctccccaaaggctacgagaca
agtgttggagagaagggcacccagttgtcaggggggcagaaacaaagggtggccatcgca
agagctctcatccgaaacccacgtgttcttatcctggatgaggcaaccagtgctctggat
gcagaaagtgagcacattgttcagcaggctctgaacaatgtcatgaaggagcacacggtg
ctggtgatcgcacatcggctcagcacagtggagaaggcagacaacatcatagtgattgac
aggggccacgtggctgaacagggccctcacagtcagctgatggccagcggggggctctac
tgcaagctggtgcagaggcaggtccttggaatacagacgggggcggacatcctaaacctg
cctgaaaacctcagctggaagcctgatggagcacatcagcggaggagacaaagcagcagc
agcagcgccagcgagtctgagtgcaaagtccgctactga
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