Hippoglossus stenolepis (Pacific halibut): 118115592
Help
Entry
118115592 CDS
T08308
Symbol
rnf180a
Name
(RefSeq) uncharacterized protein rnf180a
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118115592 (rnf180a)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118115592 (rnf180a)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118115592 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Dmrt1
Motif
Other DBs
NCBI-GeneID:
118115592
NCBI-ProteinID:
XP_047197227
LinkDB
All DBs
Position
9:19834160..19842294
Genome browser
AA seq
524 aa
AA seq
DB search
MSCHAGASGVNGSSRVGSQGTEDASEERETYTSCLKTVRPCLRSADPAGEGRSSSGEHLM
RPALPGRKSHRKTCREDGRGRWREDNQETEEERHCVGHVEGRDRGKQRQRKTERTETHGD
GGTGSTGSSSSCNSVEAREGSHNFQRGHTCLRPLSIACSQTTPINLNAQSPRPTMRAGSS
SLPHPPIQSRTTPLSPQRRPAGASRRHPLSSSREPDPFWVEVGTGAATGRSSQSRRSTEL
GEEEEGEEEEEEEEVEYGEEEGSGVMDVMSQAVTPAVLPPCVPFGERRMIKREKNRIKCL
RSSTGNPSSSSSEDEEDVSAGDREGYICAVCLDVYFSPYMCHPCNHVFCEPCLRTLAKNS
PTNTPCPLCRTIITHVFFQKELNQTARTFFPKEYLSRKQNFQKASCAKWPLPSCRKLFRI
FGGKFLNTVPRKLLYYLCSTTDNLLYISSKDCGLKECFQRQPSPNARRQFSRGGGYRLDA
LDFEDDSGGWRFDMDMVIIYIYSVNWVIGFFIFCFLCYLFFPSF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagctgccatgcgggggcctctggtgtgaatggatcaagcagagttggaagtcaagga
actgaggatgccagtgaagaaagagaaacgtacacctcatgtttaaagacagtgagacct
tgtctgaggagtgcagatccagcaggagaggggaggtcgagcagtggggagcatctgatg
agacctgccctgccggggaggaaatcacacagaaagacctgcagagaggacggcagagga
cgatggagagaggacaaccaagaaactgaggaggagagacactgtgttggacacgtagaa
ggaagggacagaggaaaacaaaggcagaggaagactgagagaactgagacacatggagat
ggaggaacaggaagcactggaagttcatccagctgtaattctgtggaagcgagagaagga
tcacacaacttccagagaggacacacatgtctcagacctctcagtattgcctgctcccag
accacccccatcaatttaaatgcccaatctcctcggcccacaatgagagccgggtcttct
tctctccctcaccctcccatccaatccagaaccacacctctgtctcctcagaggcgacct
gcaggagcctcgcgccgccacccgcttagttcatccagggagccagatcctttctgggtg
gaggtcggaacgggggcagcaactgggagatcatcgcaaagccgtcgtagcacagagttg
ggagaagaggaggagggtgaagaagaggaggaggaggaggaggtggaatatggcgaggaa
gaaggcagcggcgtgatggatgtgatgagtcaggccgtgaccccggcagtgctgccgccc
tgtgttccgtttggagagaggaggatgattaaaagagagaaaaacaggattaagtgtctg
aggagttctacaggaaacccgtccagcagcagcagtgaggacgaggaggacgtgagcgcc
ggggacagagagggttacatctgcgctgtgtgtttggacgtgtacttcagcccgtacatg
tgccacccctgcaaccacgtcttctgtgaaccctgtctgaggacgctggctaaaaacagt
cccaccaacaccccctgccccctctgcagaaccatcatcacgcacgtcttcttccagaag
gagctgaaccaaacggcgagaacattcttcccaaaggaatacctttccaggaaacagaat
tttcagaaagcgagttgtgccaagtggcctttgccgagctgcaggaaactcttccgtatc
ttcggaggcaagtttctaaatactgtcccccggaaactgttgtattacctgtgttcaact
acagataatcttctatatatcagttcaaaagactgtggcctgaaagaatgtttccagcga
cagcccagtcccaacgccagacgccagttctcccgtggaggaggctatcgtctggatgct
ctggactttgaggacgactctggaggctggcgctttgacatggacatggtcatcatctac
atctattcagtcaactgggtcatcggcttcttcatattctgcttcctctgctacctcttc
ttcccttctttttga
DBGET
integrated database retrieval system
