KEGG   Hippoglossus stenolepis (Pacific halibut): 118115665
Entry
118115665         CDS       T08308                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsp04121]
    118115665
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118115665
Ubiquitin system [BR:hsp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    118115665
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118115665
SSDB
Motif
Pfam: UBAP2-Lig GIP1_N FlaX UBA_RAD5A UBA_4 Bacillus_HBL ThiI
Other DBs
NCBI-GeneID: 118115665
NCBI-ProteinID: XP_035022865
LinkDB
Position
9:16686356..16699753
AA seq 1186 aa
MMTSLVSTQARGTRDRTLPSTTQTTQPQKQIQATAEQIRLAQVIYDKNDTDFEDKVKQLI
EVTGKTQDECIVALHDSNEDVNKAINHLLENKPDTNSWETVGKKRSLGKEGGTSEIKESR
ERKGGEREASRGRGGANRRGRGISRGREGRIEENGFEVAPGERGGDAGRRGRGRGVGGRG
RGRAAGVNRFSNQGMGTFNPADYTANSGARQETWEGDGNDSAEAPGASVGNTEEWNLEDW
NEDLSETKVFTASTAPGNPITPGHNMDLASLLSKAGVAVGASMDSDLGAIVDGPSAEDLG
QSLVFTNSHHNGRTATHSYAHATANSYAHAAAASTTYAHAALSSVLGSGFGPLSAPKPTS
PPDIRTSEQINGPRLGQRASQTLTNTTSSSNVSKDAGLPPMQSPSSASFPPLDIKSQRVE
HGPVAAHHMEMKHQPEPSAVLSQLVQRQQQSTIHPNTESLGLSQSHAPQVPTPPGHESFV
PPVRDGASPGVKLPGMEPPITEAPQRQLKTQRRRVPPPSKIPSSAVEMPGSSDMSGLNFQ
FGALDFGSEAGSGTADMAQVELPREHAPTQAPAPAATSPMSVPTAVPTQQPQSSLFSMPG
SVSEHMSSLPSLPSDPSFPSPSLGLPSATPSPSMGLPSAAAPSSAAPTIASRVESSGQRS
LPPHLGFPQSKDVPSAVGGPLTNGYSGMKTQSTQDTTSSSRTAKTESPVMTSDSGPSHHI
PSPAVTPSHLAPIPSLSSHVTNTHSSGLALATSSSLTQQMCNEESINSGVNLHAYSSASS
QIINPSLSAPMAVSSSTTNGLHQSGAPGLTPNGTNAILSAANSRTAALLSAASGKAPPNL
AQGVPPLLANQYIMGPGGLLPAYPQIYGYEDLQMLQSRLPMDYYGVTFPGTAAAMPGRDG
LANNPYSGEATKFGRNDSSSPAPPTSLSAGGVQSQPQQPQQGGTQGQGAGQSQGQQAQNQ
AFLNPPLPPGYGYTGLPYYAGMPGVPSAFQYGPTVFVPPASAKQPAMGLANPSNQYHQQH
QPSYGQHAYGAAFDDLSQAHPGEYSKGGYGGSAQSQAKSAGSGPGKAPGLSGSGNSGGVP
DMGGSIYSKTQSFDKQGFHTGTPPPFSLPSALGGTGPLNPGGAPGYAPAPFLHILPPHQQ
PHSQLLHHHLTQEAQGGPGQRSQSSSMQQKTQGSKSSYGSSPYWAN
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgatgacttcactggtcagcactcaagcccggggaactcgggatagaacgctgcccagc
accacacaaacaacacaaccacaaaaacagatacaggccacagcagaacagattcgttta
gcccaagtgatctacgacaaaaatgatactgactttgaagacaaggtcaaacagttgatt
gaggtgactggcaagactcaagatgagtgcatagttgccctccacgatagcaacgaagat
gtaaacaaagccatcaatcacctgctagagaacaaacctgacacaaactcctgggagact
gtggggaagaagcggagtcttgggaaagaaggaggaacctcagagataaaggagagcaga
gagaggaaaggaggagaaagggaggccagtcgtggacgtggaggtgccaataggaggggc
agaggaattagccgagggcgtgaaggtcgtatagaggagaatgggtttgaggtggctcct
ggagagagagggggcgacgcaggacgcagggggcgaggcagaggggtagggggtcgtgga
agaggaagagcagctggtgtcaacaggttctccaaccagggaatgggcaccttcaatcct
gcagactacacggctaactccggagctcgccaggagacatgggaaggggacggaaacgat
tctgctgaagcacctggagcatcggtagggaacacggaagaatggaatttagaagactgg
aatgaggatttgtctgagaccaaagtatttactgcctcgactgctccaggaaaccccatc
acacctggacacaatatggacctggctagccttctgtctaaggctggagtggctgtagga
gcctccatggactctgacttgggggcgatagttgatggaccctcagctgaagatttgggc
caaagcctggtgtttaccaattcccaccacaatggacgcactgcaacacacagctatgca
catgccaccgccaacagctacgcccatgctgctgctgctagtaccacatatgcacacgct
gcgctgtcctcagtcctgggttctggttttggccctctgagtgcacctaagccaacatct
ccgcctgacatcaggacatcagaacagatcaacgggcctcggcttggtcagagagccagt
caaacgttaaccaacaccaccagcagcagtaatgtttccaaagatgcagggctacctcca
atgcaaagtccttcttcggcctcttttccccctttagacatcaagtctcaaagagtagag
catggccctgtggctgcccatcacatggagatgaagcaccaaccagagccatcagcagtg
ctcagccagctggtacagaggcaacaacagtccaccatccacccaaacacagaatctctg
ggcctgtctcagtcacatgccccacaggtccccacaccaccaggtcatgagtccttcgtc
cctcctgtaagagatggagcttctccaggagtgaagctgccaggcatggagcctcccatc
acagaagcccctcagcggcagctcaagacacagagacgcagagtacctcccccctcaaag
attccgtcgtcagcagtggagatgccaggctcatcagatatgtctggtctgaattttcag
ttcggagctctcgacttcgggtctgaggcaggtagtggaacagcagacatggcacaagtg
gagttgcccagggaacacgcccccactcaggccccagctccagcagcaacatcgcccatg
tctgtccctactgctgttcccacacagcagccacagagcagcctgttctctatgccaggg
tctgtgagcgaacacatgagcagtttacccagcttaccctcagatcccagcttcccctca
ccatctttgggcttacccagtgccacgccctcaccatccatgggtcttcccagtgcagcc
gctccatcttctgcagcccctaccatagccagccgtgtggagagcagtggccaaaggtcc
ctgccgcctcatcttggcttcccacagagcaaagatgtcccatcagctgttggtggacct
ctcacaaacggctacagtgggatgaagacacagagcacacaggacactacatcatcgtct
agaacagcaaaaactgagtctcctgttatgacgagtgacagcggccccagtcaccacatc
ccttcccctgcagtgacaccttcgcacttggcacctatcccctcgctcagcagtcacgtg
accaacacccactcatctggattggccctcgccacaagttcctccctgacacaacagatg
tgtaatgaggagagcatcaacagcggtgtcaaccttcatgcctactcatctgcgtccagc
caaattatcaatcccagtctatcagcccccatggctgtcagcagctcaaccaccaatggt
cttcaccaatctggagcaccaggactaactcctaatggcacaaacgccatactctcagct
gcaaacagccgcacagctgcactgctcagcgccgcttctggtaaagctcctccaaatttg
gcccaaggagtgccacctctcctggctaaccagtacatcatgggccctggaggcttgctc
cctgcttacccgcagatctatggatatgaggatttgcaaatgctgcaatctcgccttccc
atggactattatggtgtaacattccctggtactgcggctgctatgcctggaagagatggc
cttgccaataacccatattctggtgaggcaacaaagtttggtaggaatgactcctcatct
ccagctccaccaaccagcctgtctgcaggtggggtgcagtcgcagccccaacagccacag
cagggaggaacacagggccagggtgcaggacagagccagggtcaacaggcacagaatcag
gccttcctaaacccccctctgcctcccggctatggatacactggtctgccatactatgct
ggtatgcctggggttccctcagccttccagtatggccccaccgtctttgtgcctcctgct
tcggcaaaacaacctgcaatgggtctggccaacccctccaatcagtatcaccaacagcat
cagcccagttacggacagcacgcatatggcgcagcctttgatgacctgtctcaagcccac
cctggggagtacagtaagggagggtacggaggctctgcccagtcacaggccaagtcagcg
ggcagcggcccagggaaagcaccaggactgtcaggatctggtaacagtggaggagtacct
gatatgggaggttcaatctacagcaaaacacagtcatttgacaagcagggcttccacacg
gggacaccacctcccttcagcctaccctcagcacttgggggaacaggacccctgaaccct
gggggtgctcctggctatgcccctgctcccttcctgcacatcctgccaccgcaccaacag
ccgcactcccagctgctgcaccatcacctcacacaggaggcacagggtggtcctggacag
cgcagtcagtccagcagcatgcagcagaaaacccaaggcagcaagtccagctacggcagc
tccccctattgggccaactga

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