Hippoglossus stenolepis (Pacific halibut): 118115676
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Entry
118115676 CDS
T08308
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecule (CAM) interaction
hsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
118115676 (vsig8b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118115676 (vsig8b)
04517 IgSF CAM signaling
118115676 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118115676 (vsig8b)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
CTX family
118115676 (vsig8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
I-set
ig
Ig_3
Ig_2
Ig_C17orf99
DUF4719
Ig_PDGFR_d4
Sema4F_C
Tweety
WBP-1
TM_ErbB1
TMEM154
Tmemb_9
Ig_6
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
118115676
NCBI-ProteinID:
XP_035022881
LinkDB
All DBs
Position
9:8162963..8168562
Genome browser
AA seq
362 aa
AA seq
DB search
MEPVFTSMRLKVAVLWILTTLLKTDVMEALDITSSGPQTIKKPLGATVNLGCTYTPSPQD
TGDLDIEWSDVSPDMTQKDQLMMSYTGGQTHYYGAPSRSKRIRFIGDPKLGDASVSISDV
MLSDTATYLCKVKKAPGVDTRKVTLVVMVPPSVPKCWVDGGEEKGGPVSLRCQSYRGSSP
LTYTWTRESGGALPVTATQNQQSGELLISNHTENNVGSYVCEVKNAVGKEQCKYELHAYN
PTNKVGVIVGAVIGALLLLLLLLFLIWLLICCCHKRRYEKEVANEIREDVQAPDSRPTSR
NSSLRSVMGYRTHPGVVYSSVRNHPQNSSAIYTRGNDGTSPPAIAGDKSAQLQYDHKYGY
PV
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtattcacaagtatgaggctaaaggttgccgtgctgtggattctaacaact
ctgctgaagacagatgtgatggaggcgctggacataacatcttcagggccacaaaccatt
aaaaagcccctgggggcgacagtcaacctggggtgcacctacacccccagcccccaagac
acaggcgacttggacatcgagtggtccgacgtcagcccggacatgacgcagaaagaccaa
ctgatgatgtcctatacagggggtcagacgcactactacggcgcccccagccgctccaaa
aggatccgcttcataggggaccccaagttgggggacgcctccgtctccatctcggacgtg
atgctctcagacacagccacctacctgtgtaaagtgaagaaggcgccgggtgttgacaca
cggaaagtcactctggtggtaatggttcccccctcagtgccaaagtgttgggttgatggt
ggcgaggagaaaggggggcctgtctccctacgctgtcaatcgtatcgaggatccagtcct
ctcacttatacgtggacgagagagagcgggggtgcactgccagtcactgcaacccaaaac
cagcagtctggggagctgttgataagtaaccacacagaaaacaacgttggaagttatgtg
tgtgaggtgaaaaacgctgtgggcaaagaacagtgtaaatatgagctgcatgcatacaac
ccaaccaataaggtgggtgtgatagtcggggcggtgatcggggctctgctgctgctgctg
ctcctgctgtttctcatctggctcctgatctgctgctgccacaagcgtcgctatgagaag
gaggtcgccaatgaaataagggaggacgtccaggccccagacagccgacccaccagcagg
aactccagccttcgctcagtcatggggtaccgcactcaccccggggtggtgtacagctcc
gtgaggaaccacccgcagaatagcagtgcaatctacacgagaggcaatgatgggacgtca
ccaccggccattgcaggggacaaatctgctcagctccagtacgaccataaatacgggtac
cctgtgtag
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