Hippoglossus stenolepis (Pacific halibut): 118115895
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Entry
118115895 CDS
T08308
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118115895
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118115895
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118115895
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118115895
Spliceosome [BR:
hsp03041
]
Common components
Common spliceosomal components
SR proteins
118115895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118115895
NCBI-ProteinID:
XP_035022992
LinkDB
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Position
10:8371333..8375385
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AA seq
293 aa
AA seq
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MSDNEKEFREQDSRPGSRSASPRGSAKSTSHSPARSKDGSHRSRSRSRSRSRSKSRSRSH
RSSRRHYSRSRSRSRRRGSRSRSRSGEYRHRGSHSRSPMSNRRRHIGNRANPDPNSCLGV
FGLSLYTTERDLRDVFSKYGPLSDVNIVYDQQSRRSRGFAFVYFENREDSNEAKERANGM
ELDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGGGGGGGGGSGSSSSGGSSRRVSRDCD
RGYDRGYDRGYDRDYDRYEDREYRSYRRRSPSPYYSRGYRSRSRSRSYSPRHY
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacgagaaagagttcagggagcaggactctcggcccggctcgaggagtgca
tcccctcggggctctgccaaatccaccagccactcgccagcacgctccaaagacggctcc
caccgatccaggtccaggtctcgttcgcgatctagatccaaatctaggtcccggtcccac
cgaagctcacgcaggcactactcccgctctcgttcccgctctcgcagacgcggttccagg
agcagatctcgtagcggggagtaccgtcaccgagggagccatagccgatcccccatgtca
aaccgacgcagacacattggtaaccgggccaacccagatcccaacagctgtctgggtgtg
tttggattgagcctctacaccactgagagggatctgagggatgttttctctaaatatggc
cccttgagtgacgtcaacattgtgtacgaccaacagtcgcgtcgttcgcgaggctttgcc
tttgtctactttgagaatcgtgaagactccaatgaggcgaaggagcgtgctaatggaatg
gagcttgatggacgcaggatccgagtggacttctccatcacaaaacgggcccacaccccc
acccctggtatctacatggggcgtcccacatatggtggtggcggcggtggtggtggcggt
ggcggcagcggcagcagcagcagtggtggttcgtcgcggcgagtctcgagggattgtgac
aggggctacgacagaggctatgatagagggtacgaccgtgactatgatcgttatgaagac
agagagtatagatcatacaggcgcagatctccatctccttattacagcagggggtaccgc
tctcgatcccgatcccggtcctactcacctcgtcactactga
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