Hippoglossus stenolepis (Pacific halibut): 118115908
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Entry
118115908 CDS
T08308
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04020
Calcium signaling pathway
hsp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118115908 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118115908 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hsp04030
]
118115908 (ptafr)
G protein-coupled receptors [BR:
hsp04030
]
Rhodopsin family
Others
Platelet activating factor
118115908 (ptafr)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
CitMHS
7TM_GPCR_Srd
Serpentine_r_xa
Motif
Other DBs
NCBI-GeneID:
118115908
NCBI-ProteinID:
XP_035023015
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All DBs
Position
10:9884738..9889095
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AA seq
385 aa
AA seq
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MVASTTEGTAMTVTSGPGTTASNVSTFLDSEFRYVLFPVVYGIIFILGLFANIYVLFVVR
RLRAARSMGEIRIYMTNLTIADLLFVSALPFWIGYYSRHGNWVYTDFMCRLTGSLFFINN
YCSILFLGAISVNRYWAVTRPLDAASSDHRRRGIIVCVIIWALTIGMAIPQLASPGTYTD
ENNVTRCFEGYQNETDEKKTEVAAMHFLIIGMFYVVFFLVVVCNCLIARALLSQNPPQPE
IRSASTMSRKSKRPRGVKRRALQMLLAVVGVFALCFLPHHIIQGPWTLAVLQINQGWGHV
DWDQGTLQALNDAHQITLVLMGLNCILDPVVYFFATRKFRRFIVAQVKRIGKGEGCSHTA
TSQMSMDSKNPSQRLPSEIQQPGMD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgtcaaccacagaaggaactgccatgacagtaacctctgggccgggcactaca
gccagcaatgtctcaaccttcctggactctgagtttcgttacgtcctcttccccgtcgtc
tatggcatcatcttcatcctcggcctcttcgccaacatctatgtgctgtttgttgtgcgc
cgcctccgcgcagccaggtccatgggtgaaatccgcatctacatgaccaacttgaccatt
gctgaccttcttttcgtgtccgcccttcccttctggattggctactacagtcgccatggt
aactgggtgtacacagacttcatgtgccggctgacggggtcgttgttcttcatcaacaac
tactgctccatcctcttcctcggagccatcagtgtcaacaggtactgggcggtcacccgg
cctctggacgcggcctcctcagaccacaggcgccgtggcatcatcgtgtgcgtcatcatc
tgggcattgaccatagggatggcgattcctcaattggcgtctccaggaacctacactgac
gagaacaacgtcactcgctgctttgagggatatcaaaatgagactgatgaaaagaagaca
gaagtagctgccatgcattttttaataattggaatgttctatgtcgtcttttttcttgtt
gtggtgtgcaattgccttatcgctcgagcgttactgtctcaaaatcctccccagcctgaa
ataagatctgcatcaactatgtccagaaagtccaaaaggcccaggggggtgaaacgcagg
gctctccagatgttgctggcagtggtgggagtgttcgctctgtgtttcctgccccaccat
atcatccaaggcccctggacactggcggtgttgcagatcaaccagggctggggccacgtg
gactgggaccagggcactctccaggcgctcaacgacgcacatcagatcaccttggtcctc
atgggcctcaactgcatcctggatcctgtcgtctattttttcgccacgaggaagttcaga
aggttcatcgtggctcaagttaaaagaatcggaaagggagaagggtgctcgcacacggcc
acctctcagatgtctatggacagcaaaaatccaagccagagacttcccagtgagatccaa
caacctggcatggattga
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