KEGG   Hippoglossus stenolepis (Pacific halibut): 118115911
Entry
118115911         CDS       T08308                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsp04121]
    118115911 (hltf)
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118115911 (hltf)
Enzymes [BR:hsp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118115911 (hltf)
Ubiquitin system [BR:hsp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118115911 (hltf)
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    118115911 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX DEAD zf-RING_2 RING_XB3-XBAT31 zf-RING_5 ResIII zf-ANAPC11 zf-C3HC4_4 DUF5817 Prok-RING_4 zf-rbx1 HDA2-3 zf-Nse zf-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 118115911
NCBI-ProteinID: XP_035023018
LinkDB
Position
10:complement(6784788..6794880)
AA seq 959 aa
MSSPGVQMNFHRWDMHWGSYTDDDLFSDPHESDTETLSQAIRAAAAEEPDADGSVLFGHL
QGTVVGLRFYTGVVNQGEMVGLVREPHNPYDRNAVMVANIYGSQVGHIKRELAAAMAYVM
DNNLAKVEGVVYSGTKNQYNMPVMLSFWGGEENKNAVIESMARRGYRLTTGASKPTGANQ
TSSASKKGLTIPLTAKELKNAFDNLFEGLMESKDGEKEAVESVVTPLLPHQRQALSWMCA
RENKSTLPPFWKKTGELYFNTLTCFSAKEIPERVRGGILADDMGLGKTLTTIALILTNFH
NGKPLPVERCEKGSSPFKAKTKPQMFSKLEGNSDATDGAGRSSDLPQAEVICADIPDIVE
RTSESEKSASKGKMKATKRKPSKVAPVLLEDLDFAAALGGAASDPKKKKTANKASPTAGV
ESFLPQSADDLSTRTTLIICPLSVLSNWLEQFEQHVHPNVKLNVYLYYGSERNRSKKFLS
SQDVVITTYNVLSADFANKSPLHGISWLRVVLDEGHIIRNPNTQMSKAVLDLKADRRWIL
SGTPIQNSVKDLWMLVAFLRLKPFDVREWWNRVIQRPTTQGDRDGLQNLQTLVKYITLRR
TKSSEANGRPLVSLPEKTVYVEQVELSQQEREEYELARNEGRNTIGRYVAEGSVLRNYAD
VLAILMRLRQHCCHPDLLAKVCSDLGAAATPTELRERLIEKLRLVLASGSDEECSVCLDS
VRLPVITHCAHVYCRPCIAQVISTEKETARCPLCRSEIKTKELVEFPQEEMEEESSMNSE
RWRTSSKVQALMGNLLRLRSEDGSIKSLVVSQFTRFLTILETPLREHGFTFVRFDGAMSQ
KKRTQVIREFQSSAADGPAIMLLSLKAGGVGLNLTAASRVFLMDPAWNPATEEQCIDRCH
RLGQKKKVVVTKFIVKNSVEENMVKIQRQKQDLVEKAFGSTNTESKLSPIDDIRALMEL
NT seq 2880 nt   +upstreamnt  +downstreamnt
atgtcctctccaggtgtccagatgaatttccacaggtgggacatgcattggggcagctat
actgacgacgacctcttctcagacccccatgaatccgacacagagaccctctcccaggcc
atcagagccgcggcggccgaggagccggacgcagacggcagcgtgctgtttggacacctg
cagggcaccgtggtcggcctcagattttacacaggggtggtgaatcaaggggaaatggtc
ggcttagtgcgtgagccgcacaatccatacgaccgtaacgcagtgatggtcgccaacatt
tatggcagccaggtgggacacatcaagagggagctggcagcagctatggcgtacgtcatg
gacaataacttggctaaagtagagggggtggtgtactcgggcacgaagaaccagtacaac
atgcctgtgatgctgtcgttctgggggggagaagaaaacaaaaatgccgtgattgaatcg
atggcacgccgtggatatagactgaccacaggtgcaagcaaaccaacaggtgcaaatcaa
acatcaagtgcatctaagaaaggtttgaccatcccactaactgcaaaagagctgaagaat
gcatttgataatctgtttgaaggtctgatggagagtaaagacggcgagaaagaagctgtt
gagtctgtggtcactcctctcctgccgcaccagagacaggccctgtcctggatgtgtgct
cgagaaaacaaatctacgctgccgcccttctggaagaagacaggggagctgtacttcaac
acgctcacatgtttctctgccaaagaaataccagagagggttcgtggaggaatactggca
gatgacatgggactgggaaaaactctgacaaccattgctctgatcctcaccaactttcac
aatggaaagccactgcctgtggagagatgtgagaaggggtcctcaccctttaaagctaaa
accaaaccccagatgttctccaaactagaagggaacagcgacgcaactgatggagcagga
aggagctcagaccttcctcaggcggaggtgatctgtgctgacataccggacatcgtggag
agaacgagtgagtctgagaaaagtgctagcaaaggaaagatgaaagccaccaagcgaaag
cccagtaaagtggccccagttttgctggaggatctggacttcgctgcagcgctgggtggc
gccgcatcagacccgaagaaaaagaaaactgccaacaaggccagtcccacagcgggtgtg
gaatccttcctccctcaaagtgcagatgacttatcaacaagaacaactctcatcatctgt
ccactctctgtgctcagcaactggctggagcagtttgagcagcacgtgcatcccaatgtg
aagctcaacgtgtatctgtattacggctcggagcgcaacaggagcaagaagtttttgtcc
tcccaggatgtggtgatcaccacctacaacgttctgtctgctgactttgccaataagagt
cccctccacgggatcagttggctgagggtcgtgctggatgaaggacacatcataagaaac
ccaaacacacagatgagtaaagccgtgttggacctgaaagctgaccgccgctggattctt
tcaggtactccgatccagaacagtgtgaaagacctgtggatgctggtggctttcttgcgt
ctgaagccattcgatgtgcgagagtggtggaacagagtgatccagagacccacgactcag
ggagacagggacggcctgcagaaccttcagaccctggtgaagtacatcacactgcggcgg
accaagagcagtgaggcaaatgggcgccccctggtgtccctgcctgaaaagactgtctac
gtggagcaggtggaactgagccagcaagaaagagaggagtacgagctggcgcgcaacgaa
ggaagaaacaccatcggcagatatgtagcagaggggtcagtgctgaggaactatgctgat
gtgttggccatcctgatgaggcttcgacaacactgctgccaccctgatctactggcgaag
gtttgctcagatttaggtgcggcagcgacgcccacagagctgcgggagcgtctgatcgag
aagctgcggttggtgttggccagcggctccgatgaggagtgctctgtgtgtctggactcg
gtccgtctccccgtcatcacacactgcgcacatgtttactgccggccctgcatcgcccag
gtcatcagcactgagaaggagacggcgcgttgtcctctctgtcgaagtgagatcaagacc
aaggagcttgtggagtttccacaggaggaaatggaagaagagagcagtatgaattctgag
aggtggaggacaagctcaaaggtgcaggcgctgatgggaaacctgctcaggctgcgaagt
gaagacggcagcattaaaagtttggtcgtctctcagtttacgcgtttcctcaccatactg
gagactccactcagagagcacggtttcacttttgtgcgtttcgacggcgccatgagccaa
aagaagaggacccaggtgatccgggagtttcagagctccgcggccgacggccccgccatc
atgctgctgtcactcaaagctggaggggtggggctcaacttgaccgccgcctctcgagtt
ttcctcatggatcctgcctggaacccagccactgaggagcagtgtatcgaccgctgccac
cgtctgggccagaagaagaaagtcgtcgtcaccaagtttattgtgaagaattcagtcgag
gagaacatggtgaagatccagaggcagaagcaggacctggtggagaaggcgtttggctcc
acaaacaccgaaagtaaattgtctcccattgacgacatcagagctctgatggagctgtag

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