Hippoglossus stenolepis (Pacific halibut): 118115920
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Entry
118115920 CDS
T08308
Symbol
gabra2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118115920 (gabra2a)
04082 Neuroactive ligand signaling
118115920 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118115920 (gabra2a)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118115920 (gabra2a)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118115920
NCBI-ProteinID:
XP_035023036
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Position
10:complement(23825734..23867788)
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AA seq
450 aa
AA seq
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MRGRWSSYSMSVLLSLIVLWQTRSRADSNSTRKTIDITTFTKILDSLLDGYDNRLRPGLG
DRVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQRWKDERLKFHGPMNILPLNNLMASKIW
TPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSHSCPL
KFGSYAYTKTEVTYLWTRNASQSVDVAADGSRLNQYDLVGQSVGKETIKSSTGEYTVMTA
HFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARN
SLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVREKKKEASIMKK
NNAYAVAVANYAPNITKDSTLSTISKCAQNETNKTTAETKPENKKTFNSVSKIDRISRIM
FPVLFGSFNLVYWATYLNKEPVIKDLDLSK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagaggacgatggagctcctactccatgtctgtgctgctctctctgatcgtgctgtgg
cagacccggtcaagagcagattccaattcaacacgtaaaaccatcgacatcacaaccttc
accaagatcctggacagtctgctggatggatatgacaacagattgagaccaggcctggga
gaccgcgtaactgaagtgaagactgacatctatgtgaccagctttggtccagtgtctgac
acagatatggagtacactatagatgttttcttccgtcagagatggaaggatgagcgcctt
aagtttcatggaccaatgaacattctccctctcaacaacctgatggccagtaagatctgg
acccctgacactttcttccacaatggcaagaaatctgttgcccacaatatgacgatgccc
aacaagctgctgagaatcatggaggatggaaccttgctctacactatgaggctcacggtc
caagctgagtgtcctatgcacctggaagactttcccatggactctcactcgtgtcctctg
aagttcggcagctatgcctacacaaagacagaggttacgtacctctggactcgtaatgcc
tcccagtcagtggatgttgcagctgatggatccagactcaaccagtatgatttggtgggc
cagagtgtggggaaggagaccattaaatccagtactggtgaatacacagtcatgacagct
cacttccacctgaagagaaagatcggctactttgtgatccagacatacttaccctgcatc
atgaccgtcatcctgtctcaggtctccttctggctcaatcgagaatctgtgccagccaga
actgtgtttggtgtaactacagtcctcacaatgacaaccctaagtattagtgcccgtaat
tcactgcctaaagtggcctatgctacagctatggactggttcattgctgtctgttatgcc
tttgtcttctctgcactcattgaattcgctacggtcaactacttcaccaagagaggctgg
gcctgggacggaaagagcgtggtcagggaaaagaaaaaggaagcctccatcatgaagaag
aacaatgcctatgctgtagctgtggctaactacgctcccaacattacaaaagactcgacg
ctgtccaccatctccaagtgtgcccagaatgaaaccaacaaaaccacggcagagacgaag
cccgagaacaagaaaacctttaacagcgtcagcaagatcgaccgcatctctcgcatcatg
ttccctgtgctgtttgggagctttaacctggtttattgggccacctacctgaacaaagaa
ccggtcattaaagatctggatctttccaaatga
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