Hippoglossus stenolepis (Pacific halibut): 118115973
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Entry
118115973 CDS
T08308
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecule (CAM) interaction
hsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118115973
04517 IgSF CAM signaling
118115973
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
118115973
NCBI-ProteinID:
XP_035023129
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Position
10:8808536..8824910
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AA seq
957 aa
AA seq
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MQWVTLAVALGCVCLSWASHTPTPTPTSTHTPLVDNSEEEVDEPCFEPCTCEVKEGVLHV
HCDGRSFTNVTQVSQSWVRPFKLNLQRNSLRRLYSNGFQHLGNAVSINLGNNALQDIRVG
AFNGLAKLRRLYLHENKLEVFRNDTFAGLEALEYLQADYNVIKRIDSGALRFLYKLRVLI
LNDNLIPILPAHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWNCGCE
AVQLQQWLGQIPYTAVVGDVTCEYPFHLHGKDLREIPRKALCADLPDKELQSEGGVSTAG
SHPRHSPPISKPNAHPGRVRPTKPSSMVHGSRQNTHTSSTSSSSSSAERKDRERHLRPTK
RPRPSRTSPTPRSLMPNHNPPVAGYQTRPPIPIICPLGCTCNLHITDLGLTVNCKENGFL
NVSQLTPRPLNGRKLYLSGNLIQRIYRTDFWNFSSLDLLHLGDNRISYLQEGAFSSLTSL
RSLYLNGNNLERLSPHVFLGLQNLRYLYFEYNEISEVDPGTLDSMPSLQLLFLNANLLRS
LPLGVFSGVNLARLNLRNNHLLLLPMEGVLEHLTGLVQVDLQQNPWECNCEAAPLKRWLE
GLSAVVVVGEVVCHSPEKTKGVDLRSLSMELLCPELEPQEDQDPEEHTATSTAADRGVSV
GYPGSGLGPLIPPGKDSIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRDKLPFRRQGEV
DLAGIQMECGIFTEQTHHHHHHHHHGLPETPPLPPPEHNHVYDIILPPEAASKGPDPTAA
SHMCSKPIYKEEQDAAVKQRPRQQQTFAASKESEGGYCSAAEKERNWSLEVSSSPINTVT
GAMGPLPGLHGNGILCPTVIDSQGPTPKVELVDCLFRLPAPEFRELPDRYARPPPRYPHP
QDSKQDTRPDQMLVVTTLSSTSGGGNSSQSEQGAGEQRARLRTTPDYMEVLDRSYQF
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggtcactctggcagtggccctggggtgtgtgtgtctgtcctgggcgtcgcac
acccccacccctacccccacctccacacacacccctctggtggacaactccgaggaggaa
gtggacgagccgtgcttcgagccgtgcacgtgcgaggtcaaagaaggcgtgctgcacgtg
cactgtgacgggcggagcttcactaatgtcacccaggtgtcacagtcgtgggtccgccct
ttcaaactcaacctccagaggaactctctaaggcgtctctatagcaacgggtttcagcac
cttggcaacgcagtgtcgataaacctcggcaacaatgcactccaggacatccgagtggga
gctttcaacgggctggccaaactaagacgcctgtacctccacgagaacaagctggaggtc
ttcagaaacgacaccttcgctggtttagaggctctggaatacctccaggccgactacaac
gtgatcaaacgaattgacagcggcgctctgaggttcctctacaagctccgggttctcatc
ctcaatgacaacctgatccccatcttgcctgctcatctgttcagatctgtgtctctgact
catctggacctgcggggaaaccgtctgaagagcttggcatatgctgggaccctggagtat
gttggtcgctccctgatggagctacagctggaggagaatccttggaactgtggctgtgag
gccgttcagcttcagcagtggctgggtcagatcccctacacggctgttgttggggacgtt
acatgcgagtatcccttccaccttcacggcaaggacctgagggaaattccccgcaaggcg
ctgtgtgccgacctgccggacaaagagctacaatcagaggggggtgtttccacggcaggg
tcgcacccccgtcattcgccccctatctctaaacccaacgcccacccagggcgagtcagg
cccactaaaccctcctctatggtgcacggctcccgccaaaacactcacacctcctccaca
tcttcgtcctcctcctcagcagagcgcaaagacagagagaggcacctgaggccgacgaaa
aggccccgaccctccagaacatctcccactcctcgcagtctgatgcccaaccataatccc
cccgtggccggctaccaaacacgaccccccatcccaataatctgtcccctgggctgcact
tgcaacctgcacatcacagacctcggcctgactgttaactgcaaggagaacggcttcctc
aacgtgtcccagctcacacctcggcccctcaacggccgcaagctctacctgagtggaaat
ttaattcagaggatctaccgcacagacttctggaatttctccagtctcgacctgcttcac
ctgggggacaaccgcatctcttacctgcaggagggggccttctccagcctgacaagcctg
aggagcctctacctgaatggcaacaacctggagaggctcagcccccacgtattcctgggg
ctgcagaatcttaggtacctttattttgagtacaatgagatcagcgaggtagatcccggg
acacttgactccatgccgtccctccagctgttgttcctcaatgccaacctgctgcggagc
ctccctcttggcgtgttctcaggagttaatctcgctcgtctcaatctgagaaacaatcac
cttctgctgcttcctatggagggcgtgctggagcacctcaccggactggtacaggtggac
ctgcagcagaacccgtgggagtgtaactgtgaagcagctccactgaagcggtggctggag
gggctcagcgcggttgtggtggtgggagaggtggtctgccattccccggaaaagaccaaa
ggcgtagacctgcgctccctctccatggagctgctctgccctgagctggagccccaggag
gaccaggacccggaggagcacacagccacctccacagctgcagacaggggtgtatcggtt
ggctaccccggctccgggctgggccccctgatccctccggggaaggattcaatccctctc
tcggtgttggtactcagcctgctggtgttgtttgtctctgcgttcttcgcggcagcggca
ctaatcgcctacgccctaaggaggagggacaagctgccgttccgtcgccagggagaggtg
gatttggccggcatccagatggagtgtggcatcttcactgagcagacgcaccaccatcac
caccaccaccaccacggcctcccagagacgccgccccttcctccaccggaacacaatcac
gtctacgacataatcttgccccctgaggctgcatcgaaaggtcccgaccccaccgcagct
tcgcacatgtgtagcaaacccatctacaaagaggaacaggacgccgcggtgaaacaacga
ccacggcagcaacagacatttgcagcctccaaagagagcgagggaggatactgctctgca
gcagagaaggagaggaactggtctctggaggtgtcctcatcacccatcaacactgttaca
ggagcaatgggaccgctccccggccttcatggcaacggcatcctctgccccacggtgata
gacagccaaggccccacccctaaagtcgaactggtggactgcctcttcagactccccgcc
ccagagttcagagagctgccagataggtacgcgaggccgccgccccgctacccccacccc
caagactctaaacaggacaccagacccgaccaaatgctcgtggtcaccaccctcagctcc
acgtcgggcggcggtaacagcagccagagcgagcagggtgcgggagagcagagagccaga
ctgaggaccacaccggactacatggaggtgctggaccgctcgtaccagttctaa
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