Hippoglossus stenolepis (Pacific halibut): 118115985
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Entry
118115985 CDS
T08308
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118115985 (pax1a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
118115985 (pax1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
Med3
SARAF
HTH_29
HTH_28
WD40
CCDC53
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
118115985
NCBI-ProteinID:
XP_035023147
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All DBs
Position
10:complement(17067363..17071607)
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AA seq
379 aa
AA seq
DB search
MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYEGGKQASAQAGLSYNHIYPYSYPNTMSPKMSSAAGVPVTA
GHMSLSRAWPSAHTVSNILGIRAFMDSTAMAGAEGYPPKMEEWSSVNRAAFPAAHTVNGI
DKSAIDADIKYAQPSSTLSGYVSACAYSPTNQYGVYSGSTGGYVAAGHHHWQPQSQALSH
PGGGMGMHAGEIHSSMAFKHHHAREGDRKPPSPLSKQQQQQQQQQQQQQQQQQQQQQQQQ
QQHGDMNSVHGLSLPTSSS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctatggagaggtgaaccagttaggcggcgtgttcgtcaatggacgaccc
ctgcccaacgccatacggttgagaatcgtggagctggctcagctcgggatcaggccctgc
gacatcagcaggcagctccgggtctcgcacggctgcgtgagcaagattttggcgagatac
aacgagacgggctccatcttacccggtgccatcggcgggagcaaaccgcgggtcacgacg
cctaacgtggtgaagaatatcagggaatacaaacaaaacgaccccgggatctttgcgtgg
gagatccgggacaggcttttggcggacggagtttgtgacaagtacaatgtcccgtcggtg
agttcgatcagcaggattttacgcaacaagattgggaatctctcacagcccaaccagtac
gagggcggcaagcaagcgtccgcgcaggccggcctctcctacaaccacatatacccttat
tcctaccccaacaccatgtcgccaaagatgagcagcgctgctggagtaccggtgacggcc
gggcacatgagcttatccagggcctggccttctgcgcacaccgtcagcaacatcctcggc
atacgagccttcatggattccacagccatggctggtgcggagggatatccaccaaaaatg
gaggagtggagtagcgtcaacagagcagctttcccagcggctcacacggtcaacgggatc
gacaaatccgccattgacgccgacataaaatacgctcagccttcctccacgttgtccggt
tatgtctcggcgtgtgcttactctcccaccaaccagtacggggtgtacagcgggtcgacg
ggcggctatgtggccgcgggacaccaccactggcagccgcagagccaggccctgtcccac
ccgggcggcgggatgggcatgcacgcgggggagatccactcatcgatggccttcaagcac
caccatgcccgagaaggagacagaaaaccgcccagtccgctgagcaagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcaacatggagacatgaacagtgtgcatggactcagtctccctacctcatcatcataa
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