Hippoglossus stenolepis (Pacific halibut): 118115993
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Entry
118115993 CDS
T08308
Symbol
pcare1
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118115993 (pcare1)
04812 Cytoskeleton proteins [BR:
hsp04812
]
118115993 (pcare1)
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118115993 (pcare1)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118115993 (pcare1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
Motif
Other DBs
NCBI-GeneID:
118115993
NCBI-ProteinID:
XP_035023158
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Position
10:complement(19891021..19896302)
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AA seq
1164 aa
AA seq
DB search
MGCTPSKGNNFGTLGSLRRSRMLLAAPQESPRQSLLEDGNLRNSAIPTDVDTKEWKTTEQ
TQVFQKEAHMTPQKKRSVTDFAPEAVNMDKLGSQGMDNNTVSHRKEKNNDTQDVIEKKTG
RKPKKNRGGKVLKKKDKDKLPAENKVDFPEPLVKAHQAAYAFLNPSINKYDVLLGLLEQA
TQTQVSVQPMVAFMALRYEEIIQGLEEVADEGEKVLKENGQHLAWTSQMKNLSSSPPLKS
GSANSEPPPDLLQQLLQYTTQRMRNVSQTVGGIGDSALEEAVEYFASVSELLEEKLKVKR
TVETRLMQLLSRIEMASLRKPGPEDSALLSEDSGIGAESESLAGSDRRHRRESCESTGTN
RTTPVSLIGHTYINITQGVSRQKCLSQISPSVSLTSLNSLDSTCTIMANDRRDSLLGSVS
LDDGEEDENDDDEEVEKGMGVVHVRFRTRSNSSPVEPEQHPRRLLPKRIENPQNVEMTLK
MKNAISGRIQFVPSQNAGAKSKVAGSPKTSRRHWTDEEERSPRRPQSAAPVRKALVKKTT
VARQQRSRSAESLRSKGEDPTLLELERTQKDLNQRLQRMSKSKTGVNARTAPSKQNQGSS
PAQSPAINRKLQSLEKNSSTQPLKGKVDLIRSNNKKTSGTSVVEDNIQKNKKLHKGPIKA
TPPPSPPSSPRPSSGLHRGRNSVKKLIDTFTQGIEELDSPKVLGPLVGVRKCGVPVLPGL
GNMEAVLSAGLARCRHEYISSEKTDDLDLDSLPPPPLEVLMDNSFEGANNLTTGKADDGA
TKVGKSPLLKRTVVSQKLRASVQSVTVLPSKGGLPQASKVVSHARADQQDTSTPSNFSKQ
VAQLEADPGKENDAFHHQARKIIPLRHSSNSQIERSSTSYLENNPPSSQEGLVDFQDAGN
LSVPGPNTTVSTLPPSSVVNSQPPSTPTKSRSRMLPSTPSTPNSLYRRFPSPHNCKRQPT
PPTSTSPPVNRELPTSPAVQRRLPSPPVTRKNILNSNSTSSYPFKAPSPPASPKLKRWSR
ENSSEDSSSARMISNARSVFCPVSPSLFEASIPRPPQAWISTGVSFVSRPSGNRGRFPVC
VQGPRPFIRRSHSDQRPSLSLPPRSPGVSVAETCGSEPAICTQGLDDEPIRYADLWGSQS
DLGATPRSASHPDLCVVGQAFHRD
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacaccatccaaaggtaacaattttgggactctgggttccctgaggaggagc
agaatgctgctggctgcacctcaagaaagccccagacagtccctgcttgaagacggaaat
cttcgaaattcagctatacctacagatgtggatacaaaggagtggaagacaactgaacag
acccaggtatttcagaaggaggcacatatgacaccacaaaaaaagagatctgttactgac
tttgcaccagaggcagtaaacatggataaactggggagtcaaggaatggacaacaacact
gtgtcccacagaaaagagaaaaataatgacacgcaggatgtaatcgagaaaaagactggc
agaaaaccaaagaaaaacaggggtgggaaagttcttaaaaagaaagacaaagacaagcta
cctgcagagaataaagtggacttcccagaacctctggtaaaagctcaccaagctgcttat
gcctttttaaatccaagtataaacaagtatgatgttctgcttggacttttggaacaagca
acccaaactcaggtttctgtgcagcctatggttgcttttatggccctacgctacgaggaa
ataattcagggcctggaagaggtagcagatgagggagaaaaagttttaaaagaaaatgga
caacatcttgcttggacaagtcaaatgaaaaatctttcatcttctccacctctgaagtct
ggctctgctaatagtgagcccccaccggatttgttgcagcagctgcttcagtacaccaca
cagagaatgcgaaatgtaagccagactgttggtggaatcggggattctgctttggaggag
gcagtggagtactttgcctcagtttcagagcttttagaggagaaactgaaagtcaaacgt
acagtagagactaggctaatgcaactcttatctcgtattgaaatggcctctctgcgcaag
cctgggccagaggactctgctctgctaagtgaggacagtggcattggggctgagagtgaa
tcgcttgctggatctgatagacgccatagacgagagagttgtgagtccactggaacaaat
agaactacacctgttagtcttatcggacacacctacattaacattacacaaggagtgtca
aggcaaaagtgtctaagtcaaataagtccaagtgtttccctcacctcactcaactcactc
gattctacatgcaccataatggctaatgaccgaagagattcattactaggatcagtctct
ttagatgatggggaggaagatgaaaatgatgatgacgaggaagtggagaaaggcatggga
gtagttcatgtaaggtttagaacgcgatcaaattcttcaccggtagaaccagaacagcac
ccccgtcgcctactcccaaagcgcatagagaatcctcaaaatgtagaaatgactctcaaa
atgaaaaatgctataagtggtaggatacagtttgtcccatcacagaatgctggtgccaaa
tcaaaggtagcaggcagtcccaaaaccagtagacgccattggacagatgaggaggaacga
tctccaaggaggcctcaatcagcagcacctgttcggaaggcattagtaaaaaagaccaca
gtggctagacagcaacgttcccggtcagcagaatccctacggagcaaaggtgaagatcct
actctgctcgaactagaaaggactcagaaggatttaaaccagaggttgcagaggatgagt
aaaagcaaaacaggagtaaacgcaaggacagctccatctaagcaaaatcaaggaagctca
ccagcacagtcgccagcaataaatcgcaaactgcaatccttagaaaagaacagcagtacc
caaccacttaaaggcaaagtggacttaataaggagcaacaataaaaaaacgtcaggaacc
agtgttgtggaagacaatatacaaaagaacaaaaaactacacaagggtcccataaaagcc
accccaccccctagccctccttcatcaccacggccatcatcaggacttcacagaggcagg
aattcagtcaaaaaactgattgatacctttactcaaggaatagaggaacttgatagtcct
aaagttctagggcctctcgtaggagtacgaaagtgtggtgttcctgtgttacctggttta
ggaaatatggaagccgtgctaagtgctgggttagctagatgtaggcatgaatacatctca
tctgagaaaactgatgatttagatctggatagtcttcccccgcctccactggaagtatta
atggacaattcctttgagggtgccaataatcttacaactggtaaagcagatgatggggca
acaaaagttggcaagtcgcctctgttaaaaaggactgttgtatcacaaaaattaagggcc
tcagttcagtcagtgacagtgctgccaagcaaaggaggcttgccacaagcttcaaaggtt
gtttctcatgctagagcagaccaacaggacacgtctactccatcaaactttagcaaacaa
gttgcccaactggaggcagacccaggaaaagaaaatgatgcttttcaccatcaagcaaga
aagattatacccctaagacactcttcaaactctcagatagagagatcatcaacaagttat
ctagaaaacaatccaccttccagtcaagaaggattagtagactttcaagatgctggcaac
ctatccgtgcctggacccaacactacagtgtccacattgcctccctcttcagtagtcaat
agccaaccaccttccaccccaactaagtctaggagtcgaatgttaccatccacaccttct
acgccaaacagcttatatcgaaggtttcctagtccccataactgtaaaaggcaacctact
ccaccaacttcaactagccccccagttaatagggaactccccacatcgccagcagttcag
aggaggctccccagcccacctgttacaaggaagaacatcttaaactcaaactcaacctcc
tcgtaccctttcaaagcaccatctccacctgcctcaccaaaattaaaaagatggtcaaga
gagaacagcagtgaagactcatctagtgctcggatgatcagtaatgctcgttcagtcttc
tgccctgtgtccccatccctgtttgaagcctccattccccgaccccctcaagcatggatc
tctaccggggtgtcttttgtctcacgtccttcgggaaatcgtggaaggtttcctgtatgt
gttcaaggacctcgaccattcatcagacgtagtcattcagaccaaaggccaagtctaagt
ttaccaccaagatcaccaggtgtctctgtggctgagacttgtgggagtgagccagcaata
tgcacacaggggctggacgatgagccaatcaggtacgctgacttatggggcagccaatca
gacctcggagctacaccacgctctgcatcacacccggatctgtgtgttgttggtcaggcc
tttcacagagactaa
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