Hippoglossus stenolepis (Pacific halibut): 118116142
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Entry
118116142 CDS
T08308
Symbol
khdrbs1a
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1a
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118116142 (khdrbs1a)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118116142 (khdrbs1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
Sam68-YY
KH_1
STAR_dimer
KH_5
Motif
Other DBs
NCBI-GeneID:
118116142
NCBI-ProteinID:
XP_035023395
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All DBs
Position
10:complement(15758521..15762577)
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AA seq
399 aa
AA seq
DB search
MNPADANNCNTESAIESNPAPKKAKMEDTKYLPELLAEKDSLDSSFTHAMKLISAEIERI
QKGETKKEPEKETYLDLFATKNLKLKERVLIPTKQYPRVNFVGKLLGPQGSTIKRLQEDT
GAKISVLGKGSMRDKNKEEELRKGGEAKYAHLSMELHVFIEVMAPIPEAYMRMAHAMEEV
KKFLIPEPGEHDPYMDPHFLNGSQDGSGRGRGGHPGRGRGGPPGAGPRGRGMPRGGPRGA
MRGGAPRGGLGRGNAPRGAPSGRGGPPSAPNRGGSAPRSRPPAAGAQRMLPSAGMSHQQH
QVPSSGAQPKADGYEDYPQYDDSYAEPSYEGYDNYYNQQSAPADTEYFDYGHGEAQESSY
EPYAQEDWDNSWSNSGAGGKVPQSRQSKGSYREHPYGRY
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgcggatgctaacaactgcaacacagagtccgccatagagtccaacccagcg
ccgaagaaagccaaaatggaagacaccaagtacctgccggagctcctggctgagaaggac
agcctggattcctcgttcactcacgccatgaagctcatttctgcagaaattgagaggatc
cagaagggtgaaaccaagaaggagccagagaaagaaacttacctggacctgtttgcaacc
aagaatctcaaactcaaggagcgagtactcattcccaccaagcagtaccccagggtgaac
ttcgttggtaagcttttgggacctcagggtagcacaatcaagagactccaggaggatact
ggtgcaaagatatcagttctgggtaaaggctccatgagggacaagaataaggaggaggag
ctgaggaagggcggtgaggctaaatatgcccaccttagcatggagctgcatgtgttcatt
gaggtgatggcacccatcccagaggcctatatgcgcatggctcatgccatggaggaggtc
aagaagttccttattcctgaacctggtgagcatgatccgtatatggatcctcacttccta
aatggatcccaggatgggtcaggcaggggacgaggtggtcatcctggaaggggcagaggt
ggaccccctggtgctggacccaggggccgtggaatgccacgtgggggccctcgaggagca
atgcgtggcggagctccacggggaggactgggacggggcaacgctcctaggggtgcacct
tctggtaggggtggtccaccttctgctcctaacagaggaggctcagctccccgctctagg
ccacctgcagctggggcacaaagaatgctcccatcagctggcatgtcccaccagcaacac
caagttccctcttcgggagcacaacctaaagctgacggctatgaggactatcctcagtat
gacgactcctacgcagagccatcctatgaaggatatgataattattacaatcaacagtct
gctcctgccgacactgaatattttgactatggacacggggaggcccaggaatcatcctac
gagccctatgctcaagaagattgggacaactcatggtccaattccggggctggaggcaaa
gtcccccaatccaggcagtcgaagggatcatatagagagcacccatatggaagatactga
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