Hippoglossus stenolepis (Pacific halibut): 118116152
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Entry
118116152 CDS
T08308
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04137
Mitophagy - animal
hsp04140
Autophagy - animal
hsp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118116152 (hif1aa)
04137 Mitophagy - animal
118116152 (hif1aa)
04148 Efferocytosis
118116152 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118116152 (hif1aa)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118116152 (hif1aa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
CDC45
NOA36
XRN_M
Motif
Other DBs
NCBI-GeneID:
118116152
NCBI-ProteinID:
XP_035023410
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Position
10:complement(12658245..12670684)
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AA seq
843 aa
AA seq
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MDTGIVPEKKRVSSERRKEKSRDAARSRRGKESEVFYELAQQLPLPHSVSSSLDKASIMR
LTISYLRMRKLLTSDEPVAEEETELDIQLNSSYLKALDGFLIVLSEDGDIIYLTENVNKC
LGLAQFDLTGHSVFDFTHPCDQDELREMLIHRTGSKKTKESNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDTSTEQTSNGLKEPPVPYLVLICDPVPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCLNFVLSGIQEEKLILSLEQTEDV
MLVKKEQKRQEAEEKVLVESSLPDMSPTLLKEEEEELEAAAEEEEEEEEMEMEMEEEAAV
EEEEEEEEAAVEEEEEEEEEEEAEKGPELDVIKLFTQASKARPLASLYDQLKEKPEALTL
LAPAAGDTIISLDFSCPDSEIKDVPLYNDVMLPSSSEKLALPLSPLPPSEPLNTRGGFKS
EESKAESYPPAPSTTITCHSSSEVRLSELQSFYIINSKCFAHLLICTETLMTFDISSLQA
DSPMDFCFPMDSDMSSDFKLDLVERLFAIDTEPKTPFNTQAMEDLDLEMLAPYIPMDDDF
QLRSLTPEEPLTCGQVKSLKSSPVQVTQEVDSYPSSPFSAVGSSTASPAPLGPVIVAHLA
TIIAKRTPQLDKEVSLRTLAAQNAQRKRKLGDLKDMIGQGNLLEEQLVQGKKLKASESGT
TTPVLLLSSDLASCLLGSTSEATSPLFSLPQLTRYDCEVNAPLQGRQYLLQGEELLHALD
HVN
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagagtgagctcggagcggaggaaggagaag
tccagggatgcggcgcgaagccggcgcgggaaggagtcggaggtgttctacgagctggcc
cagcagctgcccctgccccacagcgtcagctccagcctggacaaggcctccatcatgagg
ctcaccatcagctatctgcgcatgaggaagcttctcacctctgatgagccagtggcagaa
gaggaaacagagctggatatccagctaaacagctcctaccttaaggctctggatggcttc
ctcattgtgctgtctgaagatggagatatcatttatctcactgagaatgtcaacaaatgc
ctcgggctggcacagtttgacctgactggacacagcgtgttcgacttcacacatccctgt
gaccaggacgagctgcgggagatgctcatccacagaacaggctccaaaaagaccaaggag
tcaaacacagagcgcagcttcttccttcgaatgaaatgcactctgacgagcaggggccgc
actgtcaacgtcaagtcagctacatggaaggttctccactgctcaggtcatgttcgtgtt
tatgacaccagcactgaacagacttctaacggactcaaggagccacctgtcccctacctg
gttttgatctgtgaccccgtcccccacccctccaacatcgaggtccccctggacaccaag
acctttctcagccgccacacgatggacatgaagttcacgtattgtgatgagaggatcact
gagctcatgggttatgatccagaggaccttttgaatcgttctgtgtacgagtactatcac
gctctggactctgaccatctcaccaagactcaccataacttgtttgcaaagggccaggtc
agcacaggacaataccggatgttagctaagagaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaacaacaagaactcccaaccacagtgtgttgtctgtctcaacttt
gtgctcagtggtatccaggaggagaaactgatcttgtctctggagcagaccgaggatgtg
atgcttgtgaagaaggagcagaagcggcaggaggcggaagaaaaggttctagtggagagc
agcctgcctgacatgtcaccaaccctgctgaaggaggaggaagaagagctcgaggcggcg
gcagaggaggaggaggaggaggaggagatggagatggagatggaggaggaggcagcggtg
gaggaggaggaggaggaggaggaggcggcggtggaggaggaggaggaggaggaagaggag
gaagaagcggagaaaggcccagagctggatgtgatcaaactcttcacccaggcgtccaag
gcccggccactggcgagcctgtacgaccagctgaaggaaaagcctgaggccctcaccctg
ctggccccggctgctggagacacaatcatctccctggactttagctgccctgattcagag
attaaggacgtccctctctacaacgatgtcatgcttccctcctcgagtgagaagctggct
ctgcctctctcccccctgccgcccagcgagcctctcaacaccagaggaggattcaaaagt
gaggaatctaaagctgagagctatcctccagctccgtccactacaataacctgccacagc
tcctcagaggtcagactcagtgaactgcagtcattttacattataaactctaaatgtttt
gcccatttattaatatgcactgagacgttaatgacctttgacatctcttctcttcaggct
gacagtccaatggacttctgtttccccatggactcagatatgagctcagacttcaaactc
gacttggtggagaggctttttgccattgacacagagcccaagacccccttcaacacccag
gcgatggaagacttggatctggagatgttagcgccctacatccccatggacgatgacttc
cagctgcgcagtctgaccccagaagagcctctgacctgtggacaagtcaaatccctcaag
agttctccagtccaagtcacacaggaagtggacagctaccccagctcccccttcagcgca
gtaggaagtagcacagcttccccggcaccacttgggcctgtaatcgttgctcatctcgcc
accatcatcgctaagaggaccccacagttggacaaagaagtctcactcaggactctggcg
gctcagaacgcacagcgcaaaagaaaactgggagacctaaaggacatgattggacaagga
aatttgctggaggaacaactggtgcagggcaaaaagctgaaagcctcagagtcaggaaca
accacccccgttctcctgctgtcttcagacttggcttcttgtctgctgggcagcacgtca
gaggccaccagtcctctcttcagcctgccgcagctcacccgctacgactgcgaggtcaac
gcccccctgcagggccgtcagtacctgctgcagggggaggagctgctgcacgcactggac
cacgtcaactga
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