Hippoglossus stenolepis (Pacific halibut): 118116154
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Entry
118116154 CDS
T08308
Symbol
rab11fip5a
Name
(RefSeq) uncharacterized protein rab11fip5a isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118116154 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118116154 (rab11fip5a)
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118116154 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
118116154
NCBI-ProteinID:
XP_035023414
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All DBs
Position
10:complement(3733038..3757509)
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AA seq
1380 aa
AA seq
DB search
MSSLTVEDEQTWVPTHVQVTVLRGRGLRGKGKHGTSDVYAIIQLGKEKYSTGVVEKTTEP
EWREECSFELQPGVLQGGGRSGYPAGGSELVLTVMHRALIGLDVFLGQAVVQLDEVFNQS
RWVKNQWYRLNSKTGKKEKERGDIQVSVQFTRNNLTASMYDLVMKDKGTSTFNKLKERMR
GKRRSSEEDSSSAVVPGGNGSLDRVRTRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRGK
LRKSSDTRSSTSLGSESSESSRGGSLSPTAGISVVVSDLSNSPSSSNLTADNSPEHTEDA
SPKSSSLKCDSGDEAGEITIVVPQLTVCVNGSHAYKVQPLDPGSGKPVHSLGLGLLQKSL
PVSVSLQNLSPQASADPHKAPAGDGRRWSFDKPGEEEKAAIAAALEQSGPMQGDEEEEER
LGRAALSESQGKKQRRKGPSQSKDGSEGAPAATAEKHKGWFGSKDSHCKPSLVVSPKLDP
NNDPLPSSHPPSGPPVDLTALVSPLHHTNPFCRSQTSPPPLSPCNPFFSVLQHNPFYDDL
LTTLPPTPPLPPLPYLSSSRPPIAQLFPQASDHNHTVTHDNPATEDSVVGTDVATSDRRA
EVEKGLLPLAPTEGEKPLSKELSNALMSAGQLEPDSEWDESFEAFAAGRLQSPEDLSTDC
KTQQNTPSDHPLENCNNKGTLLPITDRNTSENDALHHQPCREDPWDAQEATDKFAQFLET
IPEQIHSESDNTTFNPPPDLSKLDACTETNQANSTTNTNMHQTPCNTSSTQLISSSPDPA
SSGLGSSVEDEVHSCLSSYDDKLSASSSEESEARNFESHIQRPDAAVSENPKPSESEDDI
TDRSNDWTVFDVAQQTVIQQQDGDGGPDNSEAPQSPVIPHQEPEVPELLPNLSEVQLESN
VSSQSDVFKNLIWDFSEEFNDSSGNNNTDVNILVTPDDEFSSKLPSLYVLTSSPDLKQRL
LDTSLGRQEASRSSPVSFGAFGETRPSLDFDSTLLHTQVSDQSSSSFLQSLYVSTDSQDY
QTCASHPSSSVSELDETPLSANSTLCGELSDIQTTADGALGLEKSTSASTSSNREINQTN
RFEEYNDKTNFMIGDDFGLEVLPAALNDSEESCGPKRLGEENQNAVFDDEFSRYPQAQSA
ALHRSHSEGTLTPGFDELLLPSFGSDPGAIQESSSVQPDLALPSLTSLAPSITLSSSSLV
LRSFPPLASALAGSPPSTAQAAVPEPEETQEQQQQQAASQQNSPHPVRPLTTALLAEEKR
TEGRSVLATGLEKLKSTIHPGRSSQISETETDRRKSLTEGAGSYYHLTHSELVALLGQRE
ADLRRQGAEFERQRVLLAKREVELRRLKPQVRDLEDYIDTLLVSIMEQKPTLLQVRSKLK
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtggaggacgagcagacatgggtaccgacgcacgtccaggtgacg
gtgctcaggggcaggggcttgcggggcaagggcaagcacggcaccagcgacgtgtacgcc
atcatccagctgggcaaggagaagtactcgaccggcgtggtggagaagaccaccgagccg
gagtggagggaggagtgctccttcgagctgcagcccggcgtgctgcagggcggcgggcgg
agcgggtacccggccgggggcagcgagctggtcctcaccgtcatgcaccgggcgctcatc
gggctggacgtgttcctgggccaggctgtggttcaactggatgaggtgttcaaccagagc
agatgggtgaaaaaccagtggtacagactcaactccaaaaccgggaagaaggagaaggaa
cgaggagacattcaagtcagcgtccagttcaccagaaacaacctgaccgccagcatgtac
gacctcgtcatgaaggacaaaggcacctccaccttcaacaagctcaaagaacgcatgagg
gggaagaggagatccagtgaggaagactcctcctcggccgtcgtgccaggtggaaacggg
tccctggatcgggtgcggacccggctgccgagcgatggaggcggcgaggaggactacgag
gacgacgaggggggagaggcccggcggagcaagatgaggaccttcttcctcagagggaag
ctgaggaagtcgtcggacactcgctccagcacatctctcggctccgagagcagcgagtcg
tcgcggggcgggagcctcagtcccacagcgggcatcagtgtggtggtttctgacctctcc
aactcgcccagcagcagcaacctgacggcagacaactccccagagcacacggaagacgcg
tcgcccaagtcgtcctcgctcaaatgtgactccggtgacgaggccggtgagatcaccata
gtagtgcctcagcttactgtgtgcgttaacggaagccatgcttacaaagtccagcccctg
gacccaggctcaggaaaacccgtccactctttaggcctgggactgttgcagaagtctttg
cccgtgtcggtgtcgctacagaacctcagcccgcaggcgtccgccgaccctcacaaagct
cccgcgggcgacgggcgccgctggtcctttgacaaacccggcgaggaggaaaaagcagcc
atagcggcggctttggagcaaagcgggcccatgcagggtgacgaggaagaagaggagcgt
ttgggccgggcggctctgtcagaaagccaggggaagaagcagaggaggaaagggccgagt
cagtccaaggacgggtcggagggggcccccgctgccactgcggagaaacacaagggctgg
ttcggatctaaggactcgcactgcaaaccaagcctggtggtgtcacctaaactagacccc
aacaatgatcccctcccctctagtcaccccccctcgggtccccctgtcgatcttaccgct
ctggtttctccgctgcatcacactaaccccttctgccgctcgcagacctcaccacctccc
ctgtccccctgcaaccctttcttctctgtcctccagcacaaccctttctatgacgacttg
ctaaccactctgcccccaacacccccattgcctcctctgccctatctctccagctcccgg
ccccccatagctcagctctttccgcaggcgagtgaccacaaccacactgtgacccacgac
aacccagccacagaggactccgtcgttggcaccgatgttgcaacgagtgaccggagggcc
gaagttgagaaaggtctccttcctcttgctcccacggaaggagagaaacctttgagcaag
gagttgtccaacgctttaatgtccgctgggcagctggagccagattcagagtgggacgaa
tcttttgaagcgtttgcagctggcaggctgcagtctccagaggacctgagcacagattgc
aaaacacagcagaacacgcccagtgaccatccgctggaaaactgcaataataaaggaact
ctactgcccataacggatcggaacactagtgaaaatgacgcactacatcatcaaccctgc
agagaagacccgtgggacgctcaagaagccactgacaaatttgcacaattccttgaaaca
atcccagaacagatacactctgaaagcgacaacacaactttcaatcctcctcctgattta
tcaaagcttgacgcttgcacggaaactaatcaagctaacagtaccactaacactaacatg
caccagaccccctgtaacacttcatccacacagctcatcagcagctccccggatcctgct
tcatcaggtctcggcagctcggtcgaggacgaggtccactcctgtctttcttcttatgac
gataaactttctgcgtcctcctccgaggaatctgaggcacggaactttgagagccacatt
caacgtcctgacgccgctgtgtctgaaaacccaaagccctcagaatctgaagatgacatc
accgacaggtcaaatgattggacggtgtttgatgtcgcccagcagactgttattcagcag
caggatggggatggaggtcctgacaattcagaggcaccacagtccccggtgattccacat
caggagcctgaggtcccggagttgttgccgaacctctctgaagtacaactagaatccaac
gtctcttcacagtctgatgtgttcaaaaaccttatttgggatttctctgaggagtttaat
gatagttctggaaacaacaatacagatgtgaacattcttgtgactccagatgacgaattc
tcctccaagctcccatcgttgtacgtcctgacctcctcccctgatctgaagcagcgtttg
ttggacaccagtttaggacgacaggaggcgagccggtctagtccggtgtcatttggggct
ttcggtgaaaccagacccagcctggacttcgacagcacactgttgcacactcaggtgtct
gatcagagctccagcagcttcctccaaagcctttatgtcagcaccgactcgcaggattac
cagacttgtgcgtctcacccatcctccagcgtctcggagctcgacgagacgccgctttct
gcaaactcaacgctctgcggtgagctgagcgacattcagacaactgctgacggtgctttg
ggcctagaaaagtccaccagtgcgtccacgtcatcgaacagagaaatcaaccaaaccaac
agatttgaagaatacaatgacaagacaaatttcatgataggggatgattttggtctcgaa
gttcttcctgcagcacttaacgactctgaggagagctgcggtccaaagaggctcggtgag
gaaaaccagaacgccgttttcgatgacgagttctcaagataccctcaggcccagtctgct
gcgctacaccgctcccactccgagggaaccctgacgcccggcttcgacgaactcctcctg
ccctccttcgggagcgatcccggtgcgatacaggagtcctcgtcggttcaaccagacctc
gctctcccctctctgacctccttagctccctctataactcttagtagctcctctctagtg
ctccgctccttccctccccttgccagcgctttggcggggtcaccacccagcacggcacaa
gctgctgtgccagagcccgaggagacgcaggagcagcagcagcagcaggcagccagtcag
cagaacagcccccacccagtgaggcccctgaccactgccttgctggctgaggagaagcgg
actgagggccggtcagtgctggccaccggcctggagaagctcaagtccaccatccaccca
gggaggagcagccagatcagcgagacggagacggacaggaggaagtctctgacggagggg
gcgggctcgtactaccacctgacccacagcgaactggtcgccctgctggggcagcgggag
gcggatctgcggcggcagggggcggagttcgagcgtcagcgggtcctgctggccaagcgg
gaggtggagctgaggaggctgaagccgcaggtccgagatctggaggactacatcgacacg
ctgctggtgagcatcatggagcagaagcccacgctcctgcaagtgcgctccaagctcaag
tga
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