Hippoglossus stenolepis (Pacific halibut): 118116185
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Entry
118116185 CDS
T08308
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118116185 (gabrb1)
04082 Neuroactive ligand signaling
118116185 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118116185 (gabrb1)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118116185 (gabrb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
118116185
NCBI-ProteinID:
XP_035023473
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Position
10:23923359..23976009
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AA seq
478 aa
AA seq
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MWTPLDRGGLGICCLSLLVTVVCGAQSANEPSNMSFVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWQGGSNAGSVTGVENIELPQFSIIDYQTLSKKAVFATGSYPRLSLSFK
LKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDIFLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKTNNENRSRME
SNKVQVDAHGNILLTNLTSEMSGADMMGVLHDPRATMFSYDSASIQYRKPMTSRDLYGRP
AIDRPMGHKKGRLRRRASQLKVKIPDLTDVNAIDKWSRVVFPIAFTFFNLVYWLYYVH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtggactcctctggaccgcggaggtttagggatctgctgcctgtccctcctggtgact
gtggtgtgcggggcgcagagcgccaatgaacccagcaacatgtcctttgtgaaggccacc
gtggacaagctgctgaagggctatgacatccgactgcggcctgactttggaggcgccccc
gtggatgtgggcatgagcatagacatcgccagcattgatatggtgtctgaagtcaacatg
gactataccatcaccatgtacttccagcagtcctggagagacaagcgtctgtcctacaca
ggcatccctcttaacctcaccctggacaaccgagtggcagaccagctgtgggtccctgac
acctacttcattaatgacaagaagtcctttgtccacggggtgacagtgaagaaccgaatg
atcagactgcaccctgatggaactgtgctctacggtctcagaatcaccacgacagctgcc
tgcatgatggacctgcgcagatacccactggatgagcagaactgcactttggagatagag
agctatggatacaccacggacgacatcgagttctactggcagggcggaagcaacgcaggc
tctgtgaccggggtggagaacattgagctaccccagttctccatcatagactaccagacc
ctctccaagaaggctgtgtttgccacaggctcatatccacgtctgtccctgagttttaag
ctgaagaggaacattggctatttcatcctacaaacctacatgccttccaccctgatcacc
atcctgtcctgggtctccttctggatcaactatgatgcctcggcggccagagtggcctta
ggtataaccacggtgctgaccatgaccactatcaatacccacctaagggagacgctgccg
aagatcccttatgtcaaggccattgacatttttctcatgggctgctttgtctttgtcttt
ctggcattgctggagtatgcctttgtcaactacatcttctttggccgtggtcctcacttg
cagaagaaggtagcagaaaaggctgccaaaaccaacaatgagaataggagcagaatggag
agcaacaaagtgcaggttgatgctcatggcaacatcctcctgaccaacctaaccagtgag
atgagtggagcagatatgatgggagttctccacgaccctcgggctaccatgttctcttac
gacagtgccagcatacagtaccgcaagcccatgaccagccgagacctgtacggacgaccg
gccattgatcggccaatgggccataagaagggccgcttgaggagaagggcctcacagctc
aaagtcaagatccctgacctaacggatgtcaatgccatagacaagtggtcccgtgttgtc
ttcccaatcgcattcaccttcttcaacctggtctactggctttactacgtccactag
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