Hippoglossus stenolepis (Pacific halibut): 118116193
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Entry
118116193 CDS
T08308
Name
(RefSeq) protein jagged-2 isoform X1
KO
K21635
jagged-2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118116193
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
EGF_DL_JAG
JAG1
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
RCR
Motif
Other DBs
NCBI-GeneID:
118116193
NCBI-ProteinID:
XP_035023486
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Position
10:complement(2059040..2103075)
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AA seq
1250 aa
AA seq
DB search
MWNNLGKVQRVSLVCLLLTLWAEVSQSTGYFELQLISVDNPRGQLLNGDCCDAEKSAAEG
HCGEDECDTYVRVCLKEYQSEVMTNGPCTYGSETTKVIGGNTFQFKGGQKGAQSRSNDAG
KVAIPFQFAWPRAYTVIVEAWDRDNGSHSNDEELLIERSIHKGTINPGEEKQTVEYNSLQ
YTIRVRCDEHYYGSKCNKVCRPRDDYFGHYVCDQLGNRGCMEGWTGPDCKTAICKQGCSV
LHGTCSVPADCKCNYGWQGPYCDECLPYPGCVHGTCNEPWQCTCEKNWGGLLCDKDLNYC
GTNRPCKNGGTCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCANGGTCHEVPSGFEC
HCPAGWSGPTCAKDTDECASSPCAQGGTCIDLENGFKCLCPPQWTGKTCQIDVFECVGIK
PCLNAYSCKNLIGGYHCACFRGWVGKNCHINLNSCHGQCQNGGTCKDVARGYQCGCQPGF
MGRHCEVQRNRCASSPCRNGGRCHALLDGFMCECPPGFAGTTCEVQNDPCSPSPCHNKAQ
CHSVMGDFYCSCPDDYEGKTCSELKDHCKTNQCQVIDSCTVAVATNDTQKRVWHISSNVC
GPHGRCISLPAGNFSCSCEPGFTGTYCHENINDCASSPCKNGGTCIDGINSFQCFCPNGW
EGLLCDVDVNECNRNPCQNGGQCVDLLNDFYCNCVDNWKGKTCHSRESQCDSTTCSNGGT
CYDHGDSFLCSCPSGWGGSTCNTAKNSTCDSGPCENGGTCVGKGDDFTCICKDGWKGPTC
TQNVDDCNPHPCYNGGICVDGVNWFRCECAHGFAGPDCRINIDECQSSPCAEGSTCMDEI
NAFRCVCPPGHAGPRCQEFIGLGKSCRHAGLQFPHGSRWEEECNACQCVDGYVRCSKVRC
GRRPCVLPKALPPADTNPPSCPGGHECVEHQFLTCFSAPCNQWGVCSTPDPPTPLHTQCE
PNSGYLDNSCARITLIFKKDKVPQGTTVENICSELRYLPVTQTLAEERALLILCDLSYSN
SDAVEVAMSFEQDGRSKDSDRGQIQKAASAIIGALSKRHNSTVMLAVVEVKVETLVKSPP
AGYLVPLLCVVFAVLWIFCIVVCVWWNRKRKKERERAARSNRPVNNKLETLPSYALKDNR
DKDIQYECKKLMGPSDRTCDGAEGEEEEGVHEEDEQEEDEERAPGPGDKCLSQKGSIAQD
RGMKGKGGVICTAHSAPVKAPHRTAYSPKDNRCKNLNAAKLSEDMNDHYV
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtggaataatctggggaaagtgcagcgcgtctctctagtgtgtctcctcctgacgctg
tgggctgaggtgtctcagtccaccggttacttcgagctgcagttgatctcggtggataac
cccagaggtcagctcctgaacggcgactgctgcgacgcggagaagagcgcggccgagggc
cactgcggcgaggacgagtgcgacacctacgtccgagtgtgtttaaaggaatatcagagt
gaggtcatgaccaacgggccgtgcacctacggctcggaaactactaaggttatcggtggg
aatacttttcagttcaagggcggccagaagggcgcacagagccggagcaacgacgcgggg
aaggtcgccattcccttccagttcgcgtggccgcgagcgtacactgtgatagtggaggcg
tgggacagggacaacggctcacacagcaacgatgaggagctgctgatcgagcgcagcatc
cacaaaggaaccatcaaccccggggaggagaagcagacggtggagtacaatagcctccaa
tacaccatccgcgtgcgctgcgacgagcactactacggcagcaagtgcaacaaagtgtgt
cgaccccgcgacgactacttcggtcactacgtgtgcgatcagctgggaaaccgaggctgc
atggagggctggaccgggcccgactgcaagacagccatctgcaaacaaggatgcagcgtc
ctgcatgggacgtgcagcgtgccggcggactgcaagtgtaactacggctggcagggtccg
tactgcgacgagtgcctgccgtaccccggctgtgttcacgggacctgcaacgagccctgg
cagtgcacctgtgagaagaactgggggggcctgctctgtgacaaagatctgaactactgc
gggaccaaccggccctgtaagaacggaggcacctgcatgaacacagagccggacgagtac
aactgcgcctgtccagacggatactccggcaagaactgcgagatcgcggaacacgcctgt
gtgtccaacccctgcgccaacggagggacgtgtcatgaagtcccatcaggctttgagtgt
cactgcccagccggctggtccgggccgacctgcgctaaagacacggatgaatgtgcgtcc
agcccctgcgctcagggcgggacctgcatcgacctggagaacggcttcaagtgtctctgt
ccaccccagtggacgggaaagacctgccagatcgacgtttttgagtgtgttgggatcaag
ccttgtctcaatgcttactcttgcaaaaacttgattggtggatatcactgtgcctgcttt
cgtggatgggtgggcaagaactgtcacatcaatctgaacagctgccacggacagtgtcag
aatggagggacctgcaaggacgttgccagaggctaccagtgtggttgccagccaggattc
atgggccgacactgcgaggttcagaggaaccgctgtgccagcagtccgtgtagaaacggg
ggccgctgccacgccctgctggacggattcatgtgtgaatgccctccaggcttcgctggc
acgacctgtgaggtgcagaacgacccgtgcagcccaagcccgtgtcacaacaaggcccag
tgccacagcgtgatgggagacttctactgcagctgccccgacgactacgagggtaaaacc
tgctccgagctcaaggaccactgcaagaccaaccagtgtcaagtgattgacagctgcacg
gtcgctgtggcaaccaacgacacccaaaagcgggtgtggcacatctcgtccaatgtgtgc
ggcccccacggccgctgcatcagcctgccggccgggaacttcagctgctcctgcgagccc
ggattcactggcacctactgccacgagaatattaatgactgtgcgtcgtccccctgtaaa
aatggaggaacctgcatcgatgggatcaactccttccagtgcttctgccccaacggctgg
gagggcctactgtgtgatgttgatgtgaatgagtgcaacaggaacccctgtcagaacgga
ggccagtgtgtcgacctgctcaacgacttctactgcaactgtgtggacaactggaaagga
aagacctgccactcgcgtgagagccagtgcgactccaccacctgcagcaacggagggacg
tgctacgaccacggagactccttcctgtgcagctgcccctcgggctgggggggcagcacc
tgcaacacagccaagaacagcacgtgtgactcgggtccctgcgagaacggggggacgtgc
gtcggcaaaggagacgacttcacgtgtatctgcaaggacggctggaaaggacccacctgc
actcagaatgtcgatgactgcaatccacatccctgctacaacggcggcatctgcgtcgac
ggcgtgaactggtttcgctgtgaatgcgcccacggattcgccggaccggactgccgcata
aacatagacgagtgtcagtcgtctccttgtgccgaaggttccacctgcatggatgaaatc
aacgctttccgctgtgtctgtcccccgggacacgccggacctcgctgtcaagagttcatc
ggactcgggaagtcgtgtcgtcacgctgggctgcagtttcctcacggcagccggtgggag
gaggagtgtaacgcctgccagtgtgtcgacggatacgttcgctgttctaaggtgaggtgc
ggtcgccggccctgcgtcctcccgaaggctcttcctcccgcggacaccaaccctccgtcc
tgccccggaggccacgagtgtgtggagcatcagttcctcacgtgcttctcggcgccgtgc
aaccagtggggcgtgtgttcaacgccggacccccccacacctctgcacacccagtgtgag
cccaacagcggttaccttgacaacagctgtgctcgcatcacgctcatcttcaaaaaggac
aaagtgccgcagggcaccactgtggagaacatctgctcggagctcaggtacctccccgtc
actcagacgctggctgaggagcgagcgctgctcatcctctgtgacctgtcctactccaac
agcgacgccgtggaggttgccatgtcctttgagcaggacgggcgatcgaaggacagcgac
cgaggacagatccaaaaggccgccagcgccatcatcggtgctctgtccaaacgccacaac
agcaccgtcatgttggccgtggtggaggtcaaagtggagacgctggtgaaatctcctcct
gctggttacctggtcccgctgctgtgcgtcgtcttcgccgtcctgtggatcttctgcatc
gtggtttgcgtctggtggaaccgcaagaggaagaaagagcgcgagagagcggcccgatcc
aacaggccggtcaacaacaagctggagacgctgccgagctacgccctcaaagacaaccgc
gacaaagacattcagtacgaatgcaagaaactgatgggcccctcggacaggacgtgcgac
ggggccgagggcgaggaggaggagggggtgcatgaggaggacgagcaggaggaagacgag
gagagggcgccgggccccggggacaagtgtttgtctcagaaaggctccatagcgcaggac
agggggatgaagggaaagggcggagtcatctgcacggcgcacagcgctccagtgaaggcg
ccacaccggacagcgtacagccccaaggacaaccggtgtaaaaaccttaacgccgccaag
ctcagcgaggacatgaatgaccattatgtgtga
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