Hippoglossus stenolepis (Pacific halibut): 118116333
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Entry
118116333 CDS
T08308
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118116333 (rtn1a)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118116333 (rtn1a)
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118116333 (rtn1a)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118116333 (rtn1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
118116333
NCBI-ProteinID:
XP_035023868
LinkDB
All DBs
Position
10:12876937..12897827
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AA seq
736 aa
AA seq
DB search
MSAQPGEEVGPEGKWFGDDYERNGLFGNTATRFDELRGEAKARGGDTATDDPAQQFHPRH
QDYGKRPPVAMETASTDDPMSGLFRKPMNDDGDVYTSLVSNQSFTSSRESSYLSEDLKPS
KSSTGSSALNDFSSDTYSFSSNTKMTSDLVDDIPKSLMSSDKTESYNYMDISHGDEHHEQ
HQVPPHSLVDTSLPGRDLLGSYMDNYPGRDEDEEDEEEEEKLGPALGSHSFPYVEEPSDE
ELSDYRSYRNLGGTPQTASPVKITLTESHPPAEPQQRPPAVSVSERENVLSVGLQGVPTV
TLSEPEDESPASTPNASPTQKEFSSHDMFKADTVKPAASKSSPGTKAGNREPDGSSAESG
DSEIELVSEEPPKASSNPFAQPPKSKGAFSQPNNPFDNPPVAKGGFGLVGNHAPPTAYSI
LREEREAELDSDLFIESASEESPKREQGIGGPKQGVNPASPLVPSTVPPRSAAEAVPAES
LVTEKVKTQVKTEEDRSSKPKPPTAAVPPEVRLEKPLQDNMHKPTTEGKEDLEKPEASVF
PEGFNKQKAIDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSASISFRI
YKSVLQAVQKTDEGHPFKGYLEMEIALSQDQISKYADKILLYTNTCMRELRRLFLVQDLV
DSLKFAVLMWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSV
VGKIQAKIPGAKRKEE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcagcccggtgaggaggtcggcccggaggggaagtggttcggggacgactac
gagaggaacggcctgttcgggaacacggcgacccggttcgacgagctccgcggggaggcg
aaggcgcgaggcggcgacacggcgaccgacgacccggcgcaacaatttcatccccgtcac
caggactacgggaaaaggcctcccgttgctatggagactgcatccacagatgaccccatg
tctggcctgttcaggaagcctatgaacgatgacggtgatgtctacacgtccctggtgtcc
aatcagagcttcacgtcgagccgggagtcttcttacctgtcagaagatttgaagccctcc
aagtcctccaccggctcctctgccctgaacgacttctccagcgacacctacagcttcagc
tccaacaccaagatgacctctgacctggttgatgacattccaaaatctctgatgagctcg
gataagacggaatcctacaactacatggacatcagccacggagacgagcaccatgagcag
caccaggtgcctccgcacagcctggtggacacaagcctgcctggccgtgacttgctggga
agctacatggacaactacccaggaagagatgaggatgaagaggatgaagaggaagaggag
aaactaggtccagcgctgggctctcactctttcccgtacgtggaggagccctctgatgaa
gagctgtcagattaccgctcctaccgaaacctaggcggcaccccccaaacagccagccca
gtgaagatcaccctgactgagtcccaccctccggccgagccacagcagcgtcctcctgca
gtcagtgtgtccgagcgtgaaaacgtcctgagtgtgggcttgcagggggttcccactgtt
acactgtcagagccagaggacgagagccctgcttccactcccaatgcttcaccaacacaa
aaagaattctcttcccatgacatgttcaaggctgacacagtgaagcctgcagcttccaaa
agtagccccggcacaaaggctggcaacagggagcctgatggcagcagtgcagagtctgga
gactcagagatcgagctggtgtctgaggagcctcccaaggccagtagtaacccatttgcc
cagccacctaaaagcaagggtgcattcagccagcctaacaacccctttgacaatcccccg
gtcgccaagggtggtttcggcctggtaggcaaccacgctccacccacagcctacagcatt
ctgagagaggagagagaggcagagctcgacagtgacctcttcattgagtctgcatcagag
gagagcccaaagagagagcagggcatcggtggccccaaacagggtgtgaaccctgcctct
cccctggttcccagcactgtccctccccgcagtgccgctgaggccgtgccagccgagtcc
ctggtcacagaaaaggtcaagacccaagtgaaaacagaggaggatcgctccagcaagccc
aagccccccactgccgccgtacccccagaggtgcgactggagaagccccttcaggacaac
atgcacaagcccaccactgaagggaaagaagacctagaaaaacctgaggcatcagtgttt
ccggagggttttaacaaacaaaaagctattgacctgctctactggaggaatgtgaagcag
tccggggccgtgttcagcagcgtgctcctgctcctcttctccctgacccagttcagcgtg
gtcagcgtcggggcctacttagccctggctgccctctccgccagcatcagcttcaggatc
tacaagtcggtgctgcaagccgtgcagaagaccgatgaggggcatcctttcaaaggctac
ctggagatggagatcgctctatcccaggaccagataagtaaatatgccgacaaaatcctg
ctctacaccaacacctgcatgagggagctccgcaggctgttcctcgtgcaagatctggtc
gactccttgaagtttgctgttctgatgtggctgctgacctacgtgggcgctctcttcaac
ggcctgacactgctcatcctagctgtggtctccatgttcaccatgccggtggtctatgag
aaacaccaggcacagattgatcagtatgtgggactaatacggacccaggtcaactctgtg
gtgggaaagatccaggcaaagatccccggggccaagaggaaggaggagtag
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