Hippoglossus stenolepis (Pacific halibut): 118116387
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Entry
118116387 CDS
T08308
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
hsp04210
Apoptosis
hsp04217
Necroptosis
hsp04218
Cellular senescence
hsp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118116387
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118116387
04217 Necroptosis
118116387
04218 Cellular senescence
118116387
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118116387
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118116387
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
118116387
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C2: calpain family
118116387
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GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
118116387
NCBI-ProteinID:
XP_035023960
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All DBs
Position
2:30870939..30879709
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AA seq
730 aa
AA seq
DB search
MFGGVSGRIQKERQRAGGLGSVQQAVHYMNQDFQVLREDCVQNGSLFQDPMFPAEPSSLG
FKELGPFTAKTRGVEWKRPTELTEEPQFIVGGATRTDICQGALGDCWLLAAIGSLTLNQR
LLHRVVPHGQNFNQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGSEFWSA
LLEKAYAKLSGSYEALSGGSTTEGFEDFTGGVAEMYDLKNAPGDLHRIIIKALERGSLLG
CSIDITSAFDMESVTFKKLVKGHAYSVTGLRQVEHRGQQERLIRIRNPWGQVEWTGAWSD
SSSEWNAIDSAEKDDMLCKMEDGEFWMSFQEFLRQFSRLEICNLTPDALSQDSTSFWTTV
TFEGGWRRGSTAGGCRNHPNTFWINPQYKISLLEEDDDPDDEEATCSFLVALMQKDRRRY
RSHGQDMHTIGFAIYEIPDELQGHPSVHMKKEFFLRHSSCARSESFINLREVSNRLRLPP
GEYLIVPSTFEPSKEADFVLRVFTEKQCETREMDDDVEGTFDTEEEISESDIDDSFRSMF
TQLSGDDLEISVRELRTILNRVVSKHRDLQTDGFSMESCRAMVGLMDKDGSARLGLLEFQ
ILWNKIRKWLVIFREFDLDKSGCMSSYEMRLALENGGFKLNNKLYQMLVARYADNEVIDF
DNFTCCLVKLEAMFKTFQELNKDGTGQVEVNVIEVKENRFRNQSRIKTRFRTRFRLRVTC
KLFYLLSGCC
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggggcgtgtccgggcggatccagaaggagcgtcagagggctggaggtcttggt
tcagtccagcaggcggttcactacatgaaccaggacttccaggtcctgagggaggactgt
gtgcagaacggttccctgttccaggacccgatgttcccagcagaaccgtcctcactgggc
ttcaaggaactcggaccattcaccgccaagaccagaggggtggagtggaagaggccaacg
gagctgacagaggagcctcagttcattgtgggcggtgccactaggacggacatctgtcag
ggagctctgggagactgttggctgctcgctgccattggttctctgactttgaaccaacgt
ctgctgcaccgcgtcgttcctcatggtcagaacttcaaccaacaatacgccggcatcttc
cacttccagttctggcagttcggggagtgggtggacgtggtgatcgatgatcgtctgccg
gtcaaagacggcgagctgatgttcgtccactcggccgaaggcagcgagttctggagcgct
ctgctggagaaggcctacgccaagttgagcggctcgtatgaggccttgtctggcggcagc
accaccgaaggctttgaggattttacaggcggcgtggcagagatgtacgatctgaagaat
gctcccggagatcttcatcgtatcatcatcaaagctctggagagagggtccctgctgggc
tgctccatcgatatcaccagcgccttcgacatggagtctgtgacctttaagaagctggtc
aaaggccacgcctactctgtgactggactcagacaggtggagcaccgcgggcagcaggag
cgtctgatccggatcagaaacccctggggtcaggtggagtggaccggcgcctggagcgac
agctcctcagagtggaacgccatcgactcagcagagaaggacgacatgctctgtaagatg
gaggacggagagttctggatgtctttccaggagttcctgcgtcagttctccaggttggag
atctgtaatctgacaccggacgctctcagtcaggactccaccagcttctggaccactgtg
acgtttgaagggggctggaggagggggagcaccgccggcggctgcaggaaccatcccaac
acgttctggatcaaccctcagtataagatctccctgctggaggaggatgacgaccctgat
gatgaagaggccacctgcagcttcctggtggctctgatgcagaaagatcgccgccgctac
cgcagccacggacaggacatgcacaccatcggcttcgctatctacgagattcctgacgag
ttacaaggtcatcccagtgtccacatgaagaaggagttcttcctgcgtcactcgtcctgc
gctcgctccgagtccttcatcaacctgagagaggtgagcaacaggctccgcctcccgcca
ggcgagtacctgattgtcccgtcgacctttgaaccctcaaaggaagcggacttcgtcctg
agggtgttcactgagaaacagtgcgagaccagggagatggacgacgacgtggagggaacc
ttcgacacggaggaggaaatatcagagagcgacatcgatgattccttcaggtcgatgttc
actcagctgtcaggagacgacctggagatctccgtccgagaactccgaaccatcctgaac
cgagtcgtctccaaacacagagacctgcagacggatggtttcagtatggagtcctgcaga
gccatggtcggcctcatggacaaagacggcagcgctcgccttgggctgctcgagtttcag
attctctggaacaagatcaggaagtggctggtaatcttccgagagtttgatctggataaa
tccggatgtatgagttcctacgagatgcgcctggctctggaaaatggagggttcaaactc
aacaacaagctgtaccagatgctggtcgctcgatacgccgacaacgaagtcatcgacttc
gacaacttcacctgctgcctggtcaagctggaggccatgttcaaaactttccaggagctg
aacaaagacggaacaggacaagtcgaagtcaacgtcattgaggtgaaagaaaacagattc
agaaaccagagcagaattaaaaccagattcagaaccagattcagactgcgtgtgacgtgt
aaactcttctatctcctcagtggctgctgttga
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