Hippoglossus stenolepis (Pacific halibut): 118116472
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Entry
118116472 CDS
T08308
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a
KO
K18753
butyrate response factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118116472 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118116472 (zfp36l1a)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118116472 (zfp36l1a)
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Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
zf-CCCH_UNK-like_4th
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
118116472
NCBI-ProteinID:
XP_035024076
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Position
10:complement(5507078..5511767)
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AA seq
372 aa
AA seq
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MTTAVVSPFFDFEIMNKNNKLLGFNNNLGAPHPMSVPCTGANVPISSPTGALLDRKAVGS
PSVGGVYQRRHSVSSTKFCQNQFLNSLKAGDHCSLISGVGNGSSNKENRMRDRSFSETGE
RLINKCLGPASPTGSSSQVNSSRYKTELCRPFEENGSCKYGDKCQFAHGIHELRSLSRHP
KYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPQQSSPLNSSNKIERPRLQHSYSFAG
FSTSAGLRDSPTSVTPPPMFFPDEVSDWPSSNPFTYSSQELANLFGPSLSVGPLGTEPNN
PAPPSPTSKPYYFRPMLESPQMFESPSSPPDSLSDQDGYQSSSGGSLSGSESPTLDTTRR
LPIFSRLSISDD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccgtggtgtcgcctttcttcgacttcgaaataatgaacaagaacaacaaa
ttgctcggcttcaacaacaacctgggtgccccccatcccatgtctgtcccttgcactggt
gccaatgtgcccatctccagccccaccggagccctgctggacaggaaagcggtgggatct
ccctccgtgggaggtgtgtaccagcggcggcactctgtcagcagcacaaagttctgccag
aaccagtttctgaacagcctgaaggcaggggaccactgctcgctcatctcaggggttggc
aacggcagcagcaacaaggagaaccgaatgcgagaccgctccttctctgagacaggtgag
aggctcatcaacaagtgcctgggccctgccagtcccaccggcagcagcagccaagtcaac
tccagccgatacaagacggagctttgcaggcccttcgaggagaacggctcctgcaagtac
ggcgacaaatgccagtttgctcatggaatccatgaactgcgcagcctgagccgccatccc
aaatacaaaactgagctgtgccgcaccttccacaccattggtttctgcccatatgggcct
cgctgccatttcatccacaatgctgaggagcggcgcggacctccccagcagtcctcccct
ctaaactcttccaacaagatagagaggcctcgactgcagcacagctacagcttcgcaggc
ttctccacctcagctgggctgagagacagccccacctcagtcacccctccacctatgttc
ttccctgacgaagtctccgactggcccagcagtaaccccttcacctactccagccaggag
ctggccaacctgtttggacccagcctcagtgtcggccctttaggcacagagcccaacaac
cctgcacctccctctccaacaagcaaaccttactatttcaggcccatgttggagtcccct
cagatgttcgagtctccatccagccctcctgactccctgtcagaccaagatggctaccag
agcagctctggaggcagcctgagtggctctgagtcccccacgctggacaccacccgccgt
cttcccatcttcagccgcctctccatctctgacgactaa
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