Hippoglossus stenolepis (Pacific halibut): 118116487
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Entry
118116487 CDS
T08308
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118116487 (arhgef10)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118116487 (arhgef10)
Membrane trafficking [BR:
hsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118116487 (arhgef10)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
118116487 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
118116487
NCBI-ProteinID:
XP_035024093
LinkDB
All DBs
Position
10:complement(16214662..16270465)
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AA seq
1442 aa
AA seq
DB search
MDVEDFPPPPPEMLADSVPFADEDEGEAFDFDDSGDDVPEADPPPPSPPAPSATSCKDQS
QENVVASHPEGQLPDLDPPAPSLTSDTPPLSADATVTTDEASKAGGGTGEEEGTVDTESD
LPPPPPPPLHDDTETDPGTPGREGQDPSIDDPHHPQAVARTSSQSKVNPYSVIDITPLQL
QQLEHPHAPSSSTSSPMEPKGREEEAQDVHTSPVGITSGYSVPVPCGYATPSGVPLLTPA
YTTPVIFRHISVDEDVVGTGNTSGDSVLIEEYPPIREEDALAKWASDPANTAWMENPDEV
IYDDVPRENSDSNTDPDEMIYDDVELGEEGGCNSSLDNGWSSSEFESYDEASDGEGLPEN
GLPHAFMRGKPPQKKTHLSQDLTRLKEHYEKKMKDLMANTVGTVELQQLKQKHEQKMQKL
VKAAKEGTKDGLEKTKAAVKKGRSFIKTKSFCHERKSVGFEDEESELFIEVDCFNVEPVL
CLAPEGLSQQQLVRRCILGSILESEKNYLEALKRILEQYEKPLSQLEPRLLSDRKLKMTF
YRVREILQCHFLFQIALASRVAEWDSLEMIGDVFVASFSKSMVLDAYSEYVNNFSNAMAV
VRKTCAAKPGFLEFLKHRQETSSDRMTLYGLMMKPIQRFPQFILLLQDMLKNTPVGHADR
LALQMALTELETLAEKLNEKKREADQRCEIRHIAKAMNERYLNKLLSNGSRYLIRSDDMV
ETVYNERGEIIKTKERRLFLLNDVLMCATPNIRCQDGSGSGSGNVPPEQKFLLKWSVPLS
FVEALEFGSSEDMADSSRYPAAHSGEKVVINAKPNKLYMGPGQLYQDLQNLIHDLSLVNQ
ISSMISSLKGNYQNVNPTVAQDWVSGLQRLILKKEEEIRAADRCRIQLQLPGKQDKSGKP
TYFSAVFNTLSPAIKQSWISNLQMAKLALEEDNLQGWFFAEDDGNQIKKQKHPLLLRQMP
VVMSKLQEFKVECAVHNPEPHVNTESTADTPVVGHGCVWVASCTNQMGQIAIVAMQNSSP
KVTECFNVESRILCMAFVSTEQPQENGEKVPENHHVPAAKASDSPSVCLGMEEGSIIVYK
SSQRSKKVRLQHFFTPDKSTVTSLVYKKPCLYAGLVSGSVAVYSRSQDGLWCSDKPKVLK
LGVLPVKAMLAVEEHLWASSGGQVFIISTHTHSVERQLETHQEEGMVVSHMVVAGVGIWI
AFSSGSTLRLFHTETLEPLQDINIATPVHNILPGNQRVSVSSLLVCHGLLLVGTNLGVTV
GLSVPRLQGIPKVTGRGMVSFHAHSGAVKFLTVAAAVCNRSTGPASSAPPASAQPAETED
AENTPPPSDPALTPPQGRGVWLGEAGCTAMALRDSVSSSSCGSLAPSQGSLEHGPEDGAL
YDVLHDPAHHRRGRRSSKVDVSSLLVVSGGLGHRRVNKKTKPSRHEDTTSTIMIWQIPLL
NM
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaagactttcctcccccacctcctgaaatgttggcagacagcgtccctttc
gcagacgaagatgagggggaagcctttgactttgatgacagcggtgatgatgtccctgag
gctgacccccctcccccttcacctccagccccttcagccaccagctgcaaggatcagagc
caggagaatgtggtggccagtcaccctgagggccagctccccgacctggaccccccagca
ccttccctcacatccgacacacctcctttatcagcagacgcaacagtcaccacggatgaa
gcctccaaggcaggaggaggaacaggagaagaagaggggactgttgatacagagtcagat
ttacctccacccccaccccctcctcttcatgacgacacagagacagatcctgggacacca
ggcagagagggccaggatccatccatcgacgaccctcaccatccccaggccgtcgctagg
acctcctcccagagcaaagtcaacccttactcagtcattgacatcacccctctgcagcta
cagcagcttgagcatccgcatgcgccctcctcttccacttcctcacctatggagcccaaa
ggacgagaggaagaggcccaagatgtccacacgagccccgttggcatcacctcgggatac
tcagtcccagtgccttgtggctacgcaaccccctctggtgtaccactcctcacaccagcg
tacaccacacccgtcatctttcgacacatctccgtggatgaagatgtggtcgggactgga
aacacctctggtgacagtgttttaattgaagagtatccacctattagagaagaggatgct
ttggcgaaatgggcatcagatcctgccaacactgcatggatggaaaatccagatgaggtg
atttatgatgacgtacccagagagaactctgactccaacacagacccggatgagatgatc
tatgatgacgtggagcttggagaggagggcggctgcaacagctccctcgacaatggatgg
agctctagcgagtttgaaagctatgacgaggccagcgatggcgagggcctccctgagaac
ggcctgccccacgccttcatgagaggaaagccgccccagaagaaaacccatctctctcaa
gatctgactcgcttgaaagaacactatgagaaaaagatgaaagatctaatggcaaataca
gtgggaacggtagagctgcagcagttaaaacagaaacacgagcagaagatgcaaaagctg
gtgaaggccgccaaggaggggaccaaagatgggcttgagaaaacgaaagctgcagtgaaa
aagggacgctctttcatcaaaaccaagtcattctgtcacgagaggaagtcagtgggtttt
gaagatgaggagtctgaactcttcatcgaagtggactgtttcaatgttgagccagtgctg
tgtctcgcaccagaaggtctttctcagcaacagctggtgagaagatgtatattgggatct
attttggagagtgagaagaactatcttgaagcattgaagaggatactggagcaatatgag
aagcccctgtcccagcttgagccgaggctgctgagcgacaggaaactgaagatgactttc
tatcgggtgcgtgagatcctgcagtgccacttcctgttccagattgccctggcgagtcgc
gtggctgagtgggacagcctggagatgatcggggacgtctttgtggcatcgttctcaaag
tctatggtgcttgacgcctacagcgagtatgtgaacaacttcagcaatgcaatggcggtg
gtgaggaagacgtgcgcagccaaacctggcttcttggagttcctcaagcatcgtcaggag
accagcagtgacagaatgactttgtatggcctgatgatgaaacctatccagaggtttcca
cagttcattttactccttcaggacatgctgaagaacacaccggtgggccatgcggaccgt
ctggcccttcagatggcgctgaccgaactggagacgctggcggagaagctcaatgagaag
aagagggaagctgatcagcgttgtgagatccgccacattgcaaaggccatgaacgagcgc
tacctcaacaagcttctgagcaacggcagccgctacctgattcgctcagacgacatggtg
gagacggtctacaacgagcgtggggaaatcattaaaaccaaggagcgccgcctcttcctg
ctcaatgatgttctcatgtgtgccacacccaatattcgatgtcaggatggcagtgggagt
ggcagtggaaatgttccacctgagcagaagttcctcctgaagtggagcgtgccattgagc
ttcgtcgaggcactggagtttggatccagcgaggacatggccgacagcagccgctacccg
gcagctcattctggggagaaggtggtcatcaacgctaagccaaacaaactttacatgggc
ccaggtcagttgtaccaagatcttcagaatctaatccatgacctaagccttgtcaaccag
atctccagcatgatcagcagcctcaaaggaaactaccagaatgtgaaccccaccgtggcc
caggactgggtatcaggtctccagaggttgatactgaagaaggaggaggagatcagggca
gctgaccgctgcaggatccaactccagctgcctggcaaacaagacaaatcgggtaaaccc
acttacttcagtgcagtgttcaatactttgagcccagccatcaaacagtcatggatcagt
aacttgcagatggcgaaactggctctagaagaggacaacctgcagggatggttctttgca
gaggatgatgggaaccagatcaaaaagcagaaacaccccctcttgctacgacaaatgcct
gtggtcatgtcgaaactacaggagttcaaggtggagtgtgctgttcataacccagagccc
catgtcaacacagagagcacagcagacactcccgtcgtgggccatggatgcgtctgggtt
gcaagttgcaccaaccagatgggccagatagccattgtggccatgcagaactccagccct
aaggtgaccgagtgtttcaatgtggagtcccgtatcctctgcatggcctttgtctcaact
gagcaaccccaggagaatggcgagaaggtcccagaaaaccaccacgtccctgcagcaaag
gccagcgattctcccagtgtctgtctgggcatggaggagggcagtatcatcgtgtataaa
agcagccagcggtccaagaaagtacgtctgcagcatttcttcaccccggacaagtccacg
gtcaccagcctggtctataagaaaccctgtctgtacgccggcctggtcagcggctcggtg
gccgtttactccagatcacaagacggtttgtggtgcagtgacaagcccaaggtgctgaag
ctgggagtcctcccggtcaaggccatgctggcggtggaggagcatctctgggcatcatcg
gggggccaggtcttcatcatcagcacccacacacattctgtggagaggcagctggagacc
caccaggaggagggcatggtggtgtcccacatggtggtggccggggtgggcatttggatc
gccttcagttcgggttccacactccgccttttccacacggagaccctggagcccctacag
gacattaacatcgctacaccggtccacaatatactgcctgggaaccagagagtgtcagtg
agcagcctgctggtctgtcacggtctgctgctggtggggaccaacctgggggtgactgtg
ggcctctctgtccccagactgcaggggatccccaaggtcacaggccggggcatggtgtcc
tttcacgctcacagcggagcagtcaagttcctcaccgtggctgctgcggtctgcaatcgc
tccacgggcccggcatcctccgcccctcccgcctcagcccagccagcagagactgaggat
gcggagaacacccccccgccctcggatccagcgctgactcctccacagggacggggcgtg
tggctgggagaggcgggctgcaccgccatggctctccgagactctgtgtcctcctcgtcc
tgcggctccctcgccccatcccagggctcgctggagcacgggccggaggacggggccctt
tacgacgtgctccacgacccggcccaccatcggaggggtcgccgctccagcaaggtggac
gtgagctcgctgctggtggtgtccgggggtctgggccaccgcagggtgaacaaaaagacc
aaaccgtctcgccatgaggacacaacctccactatcatgatctggcagattcctttactc
aacatgtga
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